Gene SO_3758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3758 
Symbol 
ID1171406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3905310 
End bp3906269 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content50% 
IMG OID637345532 
Producthypothetical protein 
Protein accessionNP_719295 
Protein GI24375252 
COG category[R] General function prediction only 
COG ID[COG3329] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGATA TTGTCATTGC ATTTTTCGCC TTAGGTTTGC TCGCAGGCTT AGTCAAATCC 
GACCTTAAAG TGCCACCCGC TATTTATGAA ACCCTGTCGA TTTTGTTAAT GCTTACCTTA
GGGTTAAAGG GCGGCATGGC ACTGCACGGC CATACTCAAA ACCTAGTGTT CACTGAACTC
GTTGCCGTTG TTGCATTAGG TTTGCTCATC CCATTGGCAC TTTACCCTGT GCTCACCCGC
TTAGTTCGGC TTGGGCGCAC TGATGCTATT AGCATCGCCG CCCATTATGG ATCGGTCAGC
GCGGGGACTT TTGCCGTTGT TATCGCCATG GTGGAAAAAT CAGGGATGAC ATTAAGACCC
GAAACAACTT TATATTTGGT GCTACTCGAA CTACCAGCGA TTGTGGTCAT GCTCTGGTTA
CACAGATATT TAAGCGCCAA ACAGCCGCTA CAAGCTACAG TGCCTAATAC TCAGCAATCG
AGCATACTGC ATGAAGCTTT AACTAGCCGC GGTGTGGTGC TCTTAGTCGG TGGAGTGGTC
ATTGGTTGGC TTTATGGTCC GACAGGACTT GCGGCCATTA GCCCTGTACT ATTGGGTGGA
TTTAAAACCC TACTGGCCCT GTTTTTACTG GAGATGGGAT TAGTCACGGC AAAAGTCTGT
TTACCTCTAC CACTGCAGCA ATGGCGCTTA TTAGTGTTTG CCGCCGTCAC ACCTTTTGCT
TTGGCATGGT GCGGTATTGG TGTCGGGTTA TGGCTCGAGT TACCGCCGGG AAGCATCTTG
GTGCTTGCAG GCTTGAGTGC CAGTGCCTCT TATATTGCAG CACCTGCAGC CATACGCGCC
GCCATTCCCG AAGCTAATAT TGGCCTCGCC ATGCTGGCAT CCCTTGGGAT TACCTTTCCG
GTGAACGTGT TAATCGGCTT ACCCTTGTAC CAACACTGGG TAATGCAAAT TACGGGATAA
 
Protein sequence
MPDIVIAFFA LGLLAGLVKS DLKVPPAIYE TLSILLMLTL GLKGGMALHG HTQNLVFTEL 
VAVVALGLLI PLALYPVLTR LVRLGRTDAI SIAAHYGSVS AGTFAVVIAM VEKSGMTLRP
ETTLYLVLLE LPAIVVMLWL HRYLSAKQPL QATVPNTQQS SILHEALTSR GVVLLVGGVV
IGWLYGPTGL AAISPVLLGG FKTLLALFLL EMGLVTAKVC LPLPLQQWRL LVFAAVTPFA
LAWCGIGVGL WLELPPGSIL VLAGLSASAS YIAAPAAIRA AIPEANIGLA MLASLGITFP
VNVLIGLPLY QHWVMQITG