| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3745 |
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| Symbol | rfaE |
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| ID | 1171394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3890018 |
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| End bp | 3891448 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637345521 |
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| Product | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase |
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| Protein accession | NP_719284 |
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| Protein GI | 24375241 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTTT CTCTGCCAGC ATTTGAAAAA GCCAAAGTGT TAGTCGTCGG CGATGTGATG
TTAGATCGCT ATTGGGTTGG ACCTACGGGA CGTATTTCCC CCGAGGCGCC AGTGCCTGTC
GTAAAGATTA ACCAAGTCGA GGACAGACCG GGCGGGGCGG CTAACGTGGC GCTGAATATC
GCGACCTTAG GTGGCCAAGT ACAATTGGCG GGCTTAGTGG GCGAGGATGA TACGGCTAAA
GCGTTAACAC TTGGCGTACA AGCACTTGGG GTTGAGCCAC AATGGTTGAA TATTGCTGAC
AAACCCACCA TTACCAAGCT TAGGGTGTTA TCGCGCAATC AACAGCTTAT TCGCCTCGAC
TTTGAAGAGT CCTTCGATAA GCAGGATAGC GCCCGCTTGC TTAAGCAGTC TGAGGCCTTA
CTCGATTCGG TCGATGTGGT GGTGCTGTCG GATTATGCGA AAGGCGCCAT TGATAATCCT
CGTGATTTTA TCGCGCTTGC TCGTTCCAAA GGCGTAAAAG TGCTGGTTGA CCCTAAGGGC
TCGGATTTTA GCCGTTACCA TGGCGCCTCA CTCATTACAC CAAACATGAG TGAATTTGAG
GCTGTGGTTG GTGCGGTAAC CTCTGAAGCT GACTTGCTCG AAAAGGCCCG CGGATTACTG
AACAAGTACC AGTTCGATGC TATCTTAGTC ACCCGCTCTG AAAAAGGTAT GACTTTAGTG
ACAGCTAACG CGCCAGAGCT TCATATCCCA ACGGTGGCCC GTGAGGTTTA TGATGTAACA
GGGGCTGGGG ATACTGTGAT TTCGGCCTTA GCAACCTCTT TGGCTGCGGG CGCTGAATTG
GCGCAGGCCT GTGCGATTGC CAATACTGCC GCTGGCGTTG TGGTGGGTAA ATTAGGGACT
TCTACGGTTT CTCGTATTGA GCTGATTGAA GCGCTTGCGC TGCACCATGG TGAATCTGGC
TTTGGGGTGG TGAGTGAAGA TCAACTTGCC TATGCCCTAG AGCAAGCCAA ATTACGTGGT
GAGCGAGTGG TAATGACTAA CGGTTGCTTC GACATTTTGC ATGCTGGACA TGTCAGTTAC
CTTAAACAAG CTAAAGCGCT TGGCGATCGG CTTATCGTGG CGGTCAATGA TGATGCCTCA
GTTAAACGCT TAAAAGGGGA AGGACGTCCA GTCAATCAAG TTGATAGACG TATGGCTGTT
TTAGCAGGGC TCGCCTCTGT CGATTGGGTA GTGCCTTTTA GTGAGGATAC ACCTCAGCGG
ATCATCGCTA GATTACTCCC TGATCTGTTA GTTAAAGGTG GCGATTATAA GGTTGAGGAT
ATTGCTGGCG GCGCTGAAGT GATTTCTGCG GGCGGGCAAG TTCAAGTGTT AGGATTCGAA
GACGGTATTT CTACCACGGC CATTATCCAA AATATTATGG CAAAACAGTG A
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| Protein sequence | MKVSLPAFEK AKVLVVGDVM LDRYWVGPTG RISPEAPVPV VKINQVEDRP GGAANVALNI
ATLGGQVQLA GLVGEDDTAK ALTLGVQALG VEPQWLNIAD KPTITKLRVL SRNQQLIRLD
FEESFDKQDS ARLLKQSEAL LDSVDVVVLS DYAKGAIDNP RDFIALARSK GVKVLVDPKG
SDFSRYHGAS LITPNMSEFE AVVGAVTSEA DLLEKARGLL NKYQFDAILV TRSEKGMTLV
TANAPELHIP TVAREVYDVT GAGDTVISAL ATSLAAGAEL AQACAIANTA AGVVVGKLGT
STVSRIELIE ALALHHGESG FGVVSEDQLA YALEQAKLRG ERVVMTNGCF DILHAGHVSY
LKQAKALGDR LIVAVNDDAS VKRLKGEGRP VNQVDRRMAV LAGLASVDWV VPFSEDTPQR
IIARLLPDLL VKGGDYKVED IAGGAEVISA GGQVQVLGFE DGISTTAIIQ NIMAKQ
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