Gene SO_3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3714 
Symbol 
ID1171367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3861384 
End bp3862394 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content40% 
IMG OID637345495 
Productsugar-binding protein, putative 
Protein accessionNP_719254 
Protein GI24375211 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGAT TACTGATGTT GATTATTGCA TTGGGTCTAT TACCGATATC TTCTGTCTAT 
GGAAAAGAAT TAAAATTAGC CTTAGTGCCT AAATTTTATA GCGTTTTTTT TGATCAAAGC 
AAAAATGGCT GTATCGATGC AGCGGCTCAA ATCGAAGGCG TTGAATGTAT ATATCGAGGA 
CCTGAAATAA GCAGTGTTAG ATTACAAGAT CAGGTGATAA ATCAACTGAT TGATGAAGGT 
GTTGATGGTA TTGCTGTTGC CGTTACCCAA TCTAAATATC TCGTTGAAAA TAGCCTTAAA 
CGGGCTAAAG AAGTCGGCAT TCCAATTGTT ACCTATGACT CTGACTTTGA TGCTTCAATC 
AACGGCGATC CTAAGAATTT TCGCTTAGCC TATATCGGCA CTGACAATTT TGAACTAGGT 
AAGTCATTAG GTGAAGAGTT AAAAAAATTA CGGCCTAATG GAGGCATGCT TATCATGCAG 
TCTGGGCGCC CTGATTCCCC CAATTTGAAT TTACGGTTGA TGGGAGTTCG CTCTGCTTTG 
TCGGGAAAAA AATACGATAT TCCCCCAGGG AAATTACTTA ATAACGAGCA GGGCTGGACT 
GAAGTGAGAG AACCTTTGTT TAATTTTGAC CAACTTAGTC AAGCCGTTAA GCAAATGGAG 
TCTGTTATGA AAGGCAAGCC GGTGAAAGCA GACTCGTTTA TTGCGGTTGG AGGTTGGGCG 
CAAAATAATG ATGCGCTCTA CCGTGACATG ATTGCCCCAT TTCAAGAAAA AATTAATGAT 
AAGGAAGTCG TGATTGTTAT GACTGACACC TCTCCTGAGC AATTGACGAT GTTGAAAGAT 
AATCTTGCGC ATATCAATGT CGGTCAAAAT CCCTATGAAA TGGGCAGGCA GGCAATTTTG 
ACGCTTTATA AAATTGTCAC AAAACAACAA TATGAAGAAG TCATTTACAC TCCTGTCACC 
TTTTGTACCC CACAGAATTT CAATACCTGT GAAAAGCGTG CAGGAATGTA A
 
Protein sequence
MARLLMLIIA LGLLPISSVY GKELKLALVP KFYSVFFDQS KNGCIDAAAQ IEGVECIYRG 
PEISSVRLQD QVINQLIDEG VDGIAVAVTQ SKYLVENSLK RAKEVGIPIV TYDSDFDASI 
NGDPKNFRLA YIGTDNFELG KSLGEELKKL RPNGGMLIMQ SGRPDSPNLN LRLMGVRSAL 
SGKKYDIPPG KLLNNEQGWT EVREPLFNFD QLSQAVKQME SVMKGKPVKA DSFIAVGGWA 
QNNDALYRDM IAPFQEKIND KEVVIVMTDT SPEQLTMLKD NLAHINVGQN PYEMGRQAIL 
TLYKIVTKQQ YEEVIYTPVT FCTPQNFNTC EKRAGM