Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3711 |
Symbol | |
ID | 1171364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3858101 |
End bp | 3859138 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637345492 |
Product | hypothetical protein |
Protein accession | NP_719251 |
Protein GI | 24375208 |
COG category | [S] Function unknown |
COG ID | [COG3673] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAC GTATTGTGAT TTGTGCCGAC GGCACGTGGA ATCGACCCGA GAAAGATCTT AAGGTGGATT TTCCCACCAA TGTGCTGCGT CTGGCGCGGG CTATTAGCCC GATTGCGGCC GATGGTAAAC CTCAGCAAGT GTTTTACGAC TGGGGTGTTG GCTCCTATTA CGATGAAGTG ATTGGCGGCG CGACGGGGCG TGGACTGCAT AAAAACATCA TGGATGGTTA TCGCTATATT GTGCAAAACT ACTCGCCCGG TGATGAGATT TATCTCTTTG GCTTTAGCCG CGGCGCCTAT ACAGTGCGCT GCCTGTGTGG CCTTATTAAT AACTGCGGTA TTCTAAAGCG TCCGGAAGCT CGGCTTATCC AGCAAGCCTT TGACCATTAT AAAAAAAGCA GTGCGCCCTT TGCCCCAAGC GGCGATAAAT CCGTTGAGTT TAGGCATGAA CACTGCCACG AATCGCGGGA GATTAAGTTT GTCGGCGTGT GGGATACTGT GGGCGCCATG GGGATCCCGA TTTCCTTCCT CGGCTTATTT GAAGATAAAG ACGAGTTTTA CGACACTAAA ATTGGCCGCA ATGTGCGTGT TGCCCGCCAT GCCTTGGCGA TAGACGAGCA TCGCAGCGAT TTTGAGCCGA CCATTTGGCA ATTGCGCGAC AATATGGATA TGCAGCAAGT ATGGTTTGCG GGTGCCCATA GCAATGTTGG CGGCAGTTAT CTGCCTGATA AGGATGGCTC TTTACTGTCG GATAATGCCC TTGCGTGGAT GATAGCTGAG GCTGAGCGGT TTAATTTAAG TCTCGAGCCC CATTTAACGG CTGGTTTGCG CCCTAATCCC TTGGCGACGC TGCACGATTC TCGCCGCAGT TTTTATCGAA TTAAGCAGCC GTATTTGCGG CCGCTTGATC CCGATGTTGC GCCAGTATTG TTGCATCGCT CGGTCAAAGT GCGTTGGGAG CAAGATCCCA AGTATCGGCC TAAAAACCTG CAGGCTTACC TTGAAAAGTT CGGTTGGCCA CAAGAGTTAA TCGATTAA
|
Protein sequence | MNKRIVICAD GTWNRPEKDL KVDFPTNVLR LARAISPIAA DGKPQQVFYD WGVGSYYDEV IGGATGRGLH KNIMDGYRYI VQNYSPGDEI YLFGFSRGAY TVRCLCGLIN NCGILKRPEA RLIQQAFDHY KKSSAPFAPS GDKSVEFRHE HCHESREIKF VGVWDTVGAM GIPISFLGLF EDKDEFYDTK IGRNVRVARH ALAIDEHRSD FEPTIWQLRD NMDMQQVWFA GAHSNVGGSY LPDKDGSLLS DNALAWMIAE AERFNLSLEP HLTAGLRPNP LATLHDSRRS FYRIKQPYLR PLDPDVAPVL LHRSVKVRWE QDPKYRPKNL QAYLEKFGWP QELID
|
| |