| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3689 |
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| Symbol | |
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| ID | 1171345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3839093 |
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| End bp | 3840520 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345474 |
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| Product | sigma-54 dependent nitrogen response regulator |
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| Protein accession | NP_719230 |
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| Protein GI | 24375187 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACTA TTCTGATTGT CGACGATAAC CATGCCATCT GCCAAGCGTT AGGATTAATG
CTGGAGATCA ATGGTTATCA GGTGTTAACT TGCCATACAC CAGATGATGC CCTTAACCTG
ATCGCGGCCC ACGATATTGA TCTTGTTATC CAAGATATGA ATTTCACCCG CGATACCACC
TCAGGGGAAG AAGGACGACA GCTGTTTTAT GCATTACGTG AGCGGCAACC TGATTTGCCA
ATCATTTTAA TGACGGCATG GACGCAGCTC GAAACTGCCG TCGAGTTGGT TAAAGTGGGC
GCAGCCGATT ATATGGGTAA GCCTTGGGAT GATGCTAAGT TACTCAATAG TATTACGAAT
TTAGTTGCAC TCTATAAACT TGCTTGCACA AATCATCAGC TCGAGCGGGT GAATTCACAG
CGCCAAGTGG CGATTGCCGA TGCGGAACTG TGCGGGATTG TTTTTGGTAG CGGTGCAATG
CAGCGCTGTA TCGACTTAGC CTTACAACTG GCGCGCTCCG ATGTATCCGT GTTGATCACC
GGCCCAAATG GTGCCGGTAA AGACAAGCTT GCCGATATTA TTCACGCTAA TTCTCCCTTA
AAAAACAAAC CTTTTATTAA GGTTAATGTG GGGGCTTTGC CAATGGAATT GCTTGAGGCC
GAGCTCTTTG GTGCCGAGGC AGGGGCGTTT ACTGGCGCGA ATAAAGCCAG AATGGGTCGT
TTTGAGGCTG CCGATGGTGG TACCTTGTTT TTAGATGAAA TTGGCAATTT ACCGCTTTCT
GGCCAAGTGA AGTTGCTGCG GGTATTACAA ACGGGGGAGT TTGAACGTTT AGGTAGCCAT
AAAACCTTAA AGGTGAAGGT GAGGGTGATC AGTGCGACCA ATGCCGATCT TGCCCAAGAT
ATTGCCGAAG GCCGCTTTCG TGAGGACTTG TTTTACCGCC TAAATGTGAT TGAGTTGGCC
TTGCCGCCAC TGAATCAGCG TATCGATGAT ATTCTGCCTT TAGTGAAGCA TTTTGTCGGG
GAGGGTTTTA GCTTGAGTAA ACCCGCCCAA CAGGCACTAT TGCAGCACCG TTGGCCGGGT
AATGTGCGCG AGCTAGAAAA TGCCTGTAAA CGTGCTGCTC TATTAGCTCA AAGCCGCGTG
TTAACAGAAG CGGATTTTGG TTTACCGCCA GTCCAAGCGC GTCAGTTAAG TGCAACAAAT
GCATTTGCAT TGGGACAAGC TGCGCATTTA GCCGCGGCTT TTGAGCCGCA ATCCCATCAG
TCCGTTTTTT ATTCCGAGAT CCACAGTGAG GCACAGGATG TTAGCCGTGA AGACATTGAA
GCGGCTTTAC AGCAACATAA TGGTGTGATT GCTCGGGTAG CAAAATCCTT AGGCTTGAGT
CGGCAGGCGT TATATCGGCG TATGGATAAG TTTGGTCTCG AAAAATAA
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| Protein sequence | MDTILIVDDN HAICQALGLM LEINGYQVLT CHTPDDALNL IAAHDIDLVI QDMNFTRDTT
SGEEGRQLFY ALRERQPDLP IILMTAWTQL ETAVELVKVG AADYMGKPWD DAKLLNSITN
LVALYKLACT NHQLERVNSQ RQVAIADAEL CGIVFGSGAM QRCIDLALQL ARSDVSVLIT
GPNGAGKDKL ADIIHANSPL KNKPFIKVNV GALPMELLEA ELFGAEAGAF TGANKARMGR
FEAADGGTLF LDEIGNLPLS GQVKLLRVLQ TGEFERLGSH KTLKVKVRVI SATNADLAQD
IAEGRFREDL FYRLNVIELA LPPLNQRIDD ILPLVKHFVG EGFSLSKPAQ QALLQHRWPG
NVRELENACK RAALLAQSRV LTEADFGLPP VQARQLSATN AFALGQAAHL AAAFEPQSHQ
SVFYSEIHSE AQDVSREDIE AALQQHNGVI ARVAKSLGLS RQALYRRMDK FGLEK
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