| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3688 |
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| Symbol | |
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| ID | 1171344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3837368 |
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| End bp | 3839035 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637345473 |
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| Product | nitrogen regulation protein NtrY, putative |
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| Protein accession | NP_719229 |
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| Protein GI | 24375186 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGCTGA GAACAAAATT AGTTATCTAT TCAACTGTTT GTTGTGCTTT TGGTGTCTTG
CTCACCCTTG CTACCATGAA GTACCTTTTT TCCACATCGT CCCCTGAAGT GGCTACGCCT
GCGACACTAC CCGATGTCCA GCTCCCCGAA CTGGATTTAG CACAATTGCA AGATTCGGTA
GCAGCCATCG AATCCGCAAT AAAAAATACT GAACAATTTC AACAGGCGTT TTCATTGCAG
GAACGCTTAA GAGCCGATCA AATTAAGCAT GAACTGCAAA AATTAGAACA GCTGAAGCAA
GAGCAACTGC AAATTAAGCT CTACAAGCTA GAGCTGCTTA AGCAAGGACT ATTTAACCCT
GCTCCCCATC CTGCCAATAT GGTGCCGGCG TTACCTGTGG TGGAGCAGAG TAAATTGCCA
CCGTTGTCAT TAGATCCGCA GGCTGAGCAT ACACCGCCAA TATTTGAATT GGTGTTGGTT
ATCTTGCTTG CCTGTAGCGT CTGCGCTTTG GGAGTCGCAT GGTTTACGCG ACATTTAGCC
CGAAGTCTCG ATGCGCTAGA AGTTGGATTA CTTAACTTTA ATGATAATGA CTTTAGTGTG
AGCATTCCTA CAAACGGCGA GGGGCAACTT AAGACATTGG CCGAGCTATT TAATCATTCA
GCGGCAAAGT TACGCCAAGA GCGGCAATAT ATTTATCAGC GGGAGTTATT GCTCGATAAA
GTGATCCAAA GCTCCCCCAA TGTCATGTTG CTGTTAAATG ACCATCAGAG GCTGATGTAT
GCCAATGATG CAGCTCGGCA TTTATTTCAG ATTAAAGGCA AAATGGAGGG ATTGAGCCTT
GAGGAACTGC TGCAAGAATT ACCTGAAGCC CTTGCTTTAG CGCTGAAGCA GGAAAAGAGC
GGCCTCTTTA CCATGGGGGA GGATGATGCT GAGACTTGGT ATCTGAGTCG TGGACAGTTT
TTACTGAATA ACCAACAGCA TAATTTAATC TTGCTCAAGC AGATGACCCG CGAGCTTAAT
CGTCAGGAAG TGGCAGTATG GAAAAAAGTC ATCCGTATTA TCAGCCATGA ACTGAATAAC
TCGGTGGCGC CTATTGCTTC TATGGTGAAT TCGGGGCGTT TGCTAACGAA AGATCTCGAT
AATCCAAAGC TCAAGCTGAT TTTTGATACC ATTGAAAGTC GTACTAATCA TCTTAGCCAG
TTTATTTACA ACTATGCCCG CTTTGCTAAG TTGCCTTTAC CACAGCGACG TAAAGTAGCG
TGGTCTCAGC TTATTGAGCA GTTGACACAG CATTATCCTT TCTCATTAAC CCATGAGTTG
CCGATAGAAG ATGGTTATGT TGACCAGGGA CAAATGGAAC AAGTTTTGTT AAACCTACTT
AAAAATGCCC ATGAATCTGG CTCAAATCCT GAAGAGGTAA CACTGTCGAT TCGTTATCAG
AAGATGGTTG ATGGCGGCGG CTTTAGTATC AAGATAGAGG ATCGTGGTAG TGGAATGTCT
GAGGAAGTCT TAGAGCAAGC CCTGCTGCCT TTTTATTCAA CAAAACAATC GGGTACAGGT
TTAGGCTTAC CGCTTTGCCG TGAAATTATT GAAGCCCATG ACGGTAGCAT CAGTATGCAC
AACCGCACTG AAGGCGGCTT ATCGGTACTG CTTTGGTTGC CGCAATAG
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| Protein sequence | MQLRTKLVIY STVCCAFGVL LTLATMKYLF STSSPEVATP ATLPDVQLPE LDLAQLQDSV
AAIESAIKNT EQFQQAFSLQ ERLRADQIKH ELQKLEQLKQ EQLQIKLYKL ELLKQGLFNP
APHPANMVPA LPVVEQSKLP PLSLDPQAEH TPPIFELVLV ILLACSVCAL GVAWFTRHLA
RSLDALEVGL LNFNDNDFSV SIPTNGEGQL KTLAELFNHS AAKLRQERQY IYQRELLLDK
VIQSSPNVML LLNDHQRLMY ANDAARHLFQ IKGKMEGLSL EELLQELPEA LALALKQEKS
GLFTMGEDDA ETWYLSRGQF LLNNQQHNLI LLKQMTRELN RQEVAVWKKV IRIISHELNN
SVAPIASMVN SGRLLTKDLD NPKLKLIFDT IESRTNHLSQ FIYNYARFAK LPLPQRRKVA
WSQLIEQLTQ HYPFSLTHEL PIEDGYVDQG QMEQVLLNLL KNAHESGSNP EEVTLSIRYQ
KMVDGGGFSI KIEDRGSGMS EEVLEQALLP FYSTKQSGTG LGLPLCREII EAHDGSISMH
NRTEGGLSVL LWLPQ
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