| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3680 |
|---|
| Symbol | |
|---|
| ID | 1171336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 3831692 |
|---|
| End bp | 3832132 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637345465 |
|---|
| Product | universal stress protein |
|---|
| Protein accession | NP_719221 |
|---|
| Protein GI | 24375178 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGTA CTCAAGAAGT GTTATGCCCT ACAGACTTTT CGGCAACAGC CGCCCACGCG
TTAAATTACG CCGTTGAAAT GGCTAATCTT TATCATGTAG ATATCCGCTT ACTGCATGTG
GTGAGCTCCG CAAGAAGTGC CCATTGTTAT GGTGTAGCGG TCGACACTCC GGCGACGATC
GAGCAACAGC TGGCCGAGTT TGTCGAGGCA AAAATGCAGA GTTTACAGCA GCAAATGCAG
CAGGGCTTAG CTGCAGGACT AAAGGTTAAA TGCATCGTCC GCCATGGCGA TGCAAGTGAA
GAGATTTTAG CCGAATCAGC CGATGTCGGT ATGGTAGTGA TCGCAAGTCA TGGCAGTAGT
GGTTTAGTGG ATTTTTTAAA GCACCATGTG AGCCAAGATA TTGTCAGATT AGCTAAGTGT
CCGGTATTGG TTGTTAAGTA A
|
|---|
| Protein sequence | MMRTQEVLCP TDFSATAAHA LNYAVEMANL YHVDIRLLHV VSSARSAHCY GVAVDTPATI
EQQLAEFVEA KMQSLQQQMQ QGLAAGLKVK CIVRHGDASE EILAESADVG MVVIASHGSS
GLVDFLKHHV SQDIVRLAKC PVLVVK
|
|---|
| |