Gene SO_3674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3674 
SymbolhmuU 
ID1171330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp3827012 
End bp3828028 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content51% 
IMG OID637345459 
Producthemin ABC transporter, permease protein 
Protein accessionNP_719215 
Protein GI24375172 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACAGT ATCGCTGGCT TTGGCCCACA ATGATGATGC TCCTCATCCT GAGCAGTATA 
CTCTCGGTGA GTGTCGGTCC CGTAAGCATT AGTCTTATGG ACTCCCTCAG TGCGGTATTT 
AATTGGGCAA CCCAGCAAAG CATTGGCAAT ATTGCGCCCC ATGAGCAACT GGTGGTGAGT 
AACGTGCGCC TACCAAGAAC CTTGTTAGCC CTTACGGTAG GCGCGATCCT TGCTCAATGT 
GGTGCTGTGA TGCAGGGATT ATTCCGCAAT CCACTGGCAG ATCCAGGTAT TATCGGGGTG 
TCATCGGGGG CCGCATTAGG TGCGGCCATC TGTATCGTGT TATTTCCCGA CGTGGGATCT 
TTAATGATTT CCCTTGGCGC CTTTCTCTGT GGGTTAGCCA CAACCCTGAT CGTTTATCGT 
CTGGCGAGTA ACGGTTTAGG CACATCTGTG GTGTTATTGC TGCTTTCCGG CGTGGCGATT 
GCAGCGCTAG CAGGAGCGGG CATAGGCGTA CTGACTTATC TCGCTAATGA TATGGCATTA 
CGTGACTTAA CCCTTTGGCA AATGGGCAGT ATTGCGGGGG CTCAATGGCA ATATGTCGGC 
CTGTGTTTAC TGGTATTAGT GCTGCTGAGT TGGCGTTTTC AGCGTGATGC CATGGCACTT 
AATGCCCTGC TACTGGGTGA AGCTGAAGCC CGACATTTAG GGATTAATGT CGACCGTCTT 
AAGTTAAGAC TCATCCTACT CTGTGCATTA GGCGTAGGCG TCAGTGTGGC CGCAACAGGG 
ATTATCGGTT TTATTGGTCT AGTGGTTCCC CATTTAGTGC GGATGATTTT GGGGCCCGAT 
CATAAACGAC TTTTACCCAT GAGCGCCCTC TTGGGAGCTG CGCTTTTAGC CTTAGCTGAC 
ATAGGTGCGC GGACATTTTT ACCCCCCGCC GAATTACCTG TCAGCTTAGT CACAGCGCTT 
ATCGGTGCGC CTTTCTTTAT CTTTTTACTC CTGCAACAAC GCAGCAAATT AATCTAA
 
Protein sequence
MLQYRWLWPT MMMLLILSSI LSVSVGPVSI SLMDSLSAVF NWATQQSIGN IAPHEQLVVS 
NVRLPRTLLA LTVGAILAQC GAVMQGLFRN PLADPGIIGV SSGAALGAAI CIVLFPDVGS 
LMISLGAFLC GLATTLIVYR LASNGLGTSV VLLLLSGVAI AALAGAGIGV LTYLANDMAL 
RDLTLWQMGS IAGAQWQYVG LCLLVLVLLS WRFQRDAMAL NALLLGEAEA RHLGINVDRL 
KLRLILLCAL GVGVSVAATG IIGFIGLVVP HLVRMILGPD HKRLLPMSAL LGAALLALAD 
IGARTFLPPA ELPVSLVTAL IGAPFFIFLL LQQRSKLI