| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3672 |
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| Symbol | exbD1 |
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| ID | 1171328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3825525 |
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| End bp | 3825962 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345457 |
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| Product | TonB system transport protein ExbD1 |
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| Protein accession | NP_719213 |
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| Protein GI | 24375170 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAGCA CTCACCACAC GTCGTTACCC CAAGCGGGGA TCAGTGCCTT AGAGCCACTC
CCCAGCGTCG ATCTTACGGC ATTGATTGAT ATTATTTTTA TTGTTTTAGT GTTTCTGTTA
CTCACCGCCA ATAGCCGTTT GCTGAGCTTA CCCGTTGATG TGCCTCAAAG CCCAAGCAGC
GCCATTATTG CACTCGAGCA TAAGCAATCG ATAGCCATCA ATATTATGGC GAGTTCACCC
TACTGGGCGA TTAATGGCGA AAAATTTGCT GATTTAACCG CGTTTAGTAC CGCGTTTGAA
GCGCAGTTAA CGGCCCAACC ACAGGCCACC GTCATTATTG CTGCCGATAA GGCCGCGCCA
GTTGAACCGC TAATGCAGCT ACTGGCACTT TTGCAGGGCA ACGCCATTAA TCAAACCCAA
ATTTTGATGG AACATTAA
|
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| Protein sequence | MISTHHTSLP QAGISALEPL PSVDLTALID IIFIVLVFLL LTANSRLLSL PVDVPQSPSS
AIIALEHKQS IAINIMASSP YWAINGEKFA DLTAFSTAFE AQLTAQPQAT VIIAADKAAP
VEPLMQLLAL LQGNAINQTQ ILMEH
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