| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3669 |
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| Symbol | hugA |
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| ID | 1171325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3821526 |
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| End bp | 3823619 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637345454 |
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| Product | heme transport protein |
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| Protein accession | NP_719210 |
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| Protein GI | 24375167 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAA AGCCGTTAGT GATCGCCGTT GCGATGGCAC TAAGTAGTAC GGCGCTAAGT
TTTGCGTTAG CGGCTGAAGA AGGCGTCAAA CCCACTGCGG TTCAGAAGAG TGCTGAACAG
GGAGTTGTCG AAACTGAATT TGATGAAGTG TTAGTGAGTG CGACGCGTTT GAGTGAGAAA
GTGTCTGAAA CCAGTCGAAG TGTTGCTGTT GTCGCAGAAG AGCAGCTTAA CGTTTCACAG
GCTTCATCGG TTGCAGAAGT ATTAAAAAAC GAAGCGAATA TTAACTTAAC AAATGGCCCA
AGAGCGACCT CTCAGGGCGT CGAAATTCGT GGTTTAAGCG GTGATCGTGT TTTACAAACG
ATCGATGGTG CCAGGCAAAA TACCAGTTCG GGTCATCGCG GTTCCTATTT TATGGACCCT
GAACTACTTA AATCTATCGA GGTGATCCGT GGCCCTGCCA GTAGTTTGTG GGGCAGTGGT
GCCCTCGGCG GCGTTGTTGC ACAAAATACT AAGTCTGCTC AGGATTTTTT AGCGCCAAAT
GAAACCTTTG GTGGTTACCT AAAGCAAGGC TATGACACCA ATGGCGACCG CACTAAAACC
AGCGGTGCAG TCTATGGCCA GCAAGCGACA GTCGATTGGT TGCTCAATGG CAGTTATTTT
GATTCCAATA ATATTAATAC CGGCAATGAT GAAACCTTAG TCAACAGCGC TTCTTCAGGA
AGCAGTGGAC TGGCTAAATT CGGCTGGCAG GCAGATGAAG CCTCGCGCTT AGCGTTATCG
GCAAGAGTTA ACAAGATTAA TGAATTGGTG CCAAGTAACC CTTCAGCAGC GGTGAGTAGC
TCAGTGCCTT TAGTGCGCCG CAAAACGGAC GATCAAAATA TCACCCTCAA TTACAGCTTA
GCGCCAGCCA ATAATCCTTA TTTGGATACT CATCTGCAGG TTTATTGGAA TAGCACAGAT
TACGACGAAG ACCGTGTCAC TAAAGGCCAA TTAGACAGTA CTGAATACCG CACCGTTGGC
ATTAATTTGA ACAATAGTTC TCAACTCGGT AACACTAAGT TGACCTACGG TGTTGATGGC
TATCGCGATA CCCTTAAAAC CGTCAGAGAC GATAAGGGAC AGGTTGGGCA GCGTCCTGAG
GATATTGATG GCGAAACAAC GGTATGGGGA GCTTTTACTC GGGCGGATGT GCAACTGACA
CAAACGGTAA ACCTCGATGC AGCTTTGCGT TATGACAGTT TTAAAAACCA GAGTCATAAC
CTTAACGCAT CTGCTGATGA TACTGAGCTA TCTCCTTCAC TTGGATTAAG TTGGCAAACG
CAGCCATGGC TGACCTTAAG TGCGCGCTAT GATCAGGCCT TCCGAGCGCC GACGGTGGAA
GAAATGTTCT CTAGCGGCAC CCATTACTGC ATCCCGCCGA TCCCCGGATT CTTACCCAAA
GGGTTATGTA ACACCTTTGC GACGAATCCT AACCTAAAGT CTGAAGTGGC GCGTAATAAA
GAGCTTAAAG CTGACTTTCG CTTCAATGAG TTAGCGGGTG ATGATGAGTT AGCGATTACT
TTAAACATCT TCCGTAACGA TGTGGACGAT TTTATTGTTC AGCAAGTCTC TAATCCGTAT
CGGGGAATAC CAGGACTTGA GCAAACAACC TCGTGGAACA ATGTGGAAGA CGCTCAATTA
ACTGGCTTTG AACTCAGCGG TCGTTATCGC ATCGGACAAA CGCGTTTAGC GATGAATTAT
GGTCAAACCC GCGGAGAAGA CCGTAACACT GGCGATTATA TCGAAGGGAT GCCAGCCAAT
AAGTTTAATG TCGACCTGTC CCAAGGGATT ATGGAAGGCG ATATGAAGCT AGGCACTCGA
GTGACCTATG TTGCCAGCCA AACGAATACA CCTACAGGCT ACAGTGTTGC TAAGTATGAT
GAATACACCC TTTGGGATGT GTACTTAGCA TGGGAGCCCG CGATGGGTGT GATGTCGGGC
CTGAGAGTTG ATTTTGCCAT TGAAAACATT GGTGATGAGA AGTATCAGCA GGCGTGGCAA
ACCTTGTATC AGCCCGGCCG TAATATGAAG CTGTCTGCAC GCTACATGTT CTAA
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| Protein sequence | MNKKPLVIAV AMALSSTALS FALAAEEGVK PTAVQKSAEQ GVVETEFDEV LVSATRLSEK
VSETSRSVAV VAEEQLNVSQ ASSVAEVLKN EANINLTNGP RATSQGVEIR GLSGDRVLQT
IDGARQNTSS GHRGSYFMDP ELLKSIEVIR GPASSLWGSG ALGGVVAQNT KSAQDFLAPN
ETFGGYLKQG YDTNGDRTKT SGAVYGQQAT VDWLLNGSYF DSNNINTGND ETLVNSASSG
SSGLAKFGWQ ADEASRLALS ARVNKINELV PSNPSAAVSS SVPLVRRKTD DQNITLNYSL
APANNPYLDT HLQVYWNSTD YDEDRVTKGQ LDSTEYRTVG INLNNSSQLG NTKLTYGVDG
YRDTLKTVRD DKGQVGQRPE DIDGETTVWG AFTRADVQLT QTVNLDAALR YDSFKNQSHN
LNASADDTEL SPSLGLSWQT QPWLTLSARY DQAFRAPTVE EMFSSGTHYC IPPIPGFLPK
GLCNTFATNP NLKSEVARNK ELKADFRFNE LAGDDELAIT LNIFRNDVDD FIVQQVSNPY
RGIPGLEQTT SWNNVEDAQL TGFELSGRYR IGQTRLAMNY GQTRGEDRNT GDYIEGMPAN
KFNVDLSQGI MEGDMKLGTR VTYVASQTNT PTGYSVAKYD EYTLWDVYLA WEPAMGVMSG
LRVDFAIENI GDEKYQQAWQ TLYQPGRNMK LSARYMF
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