Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3665 |
Symbol | |
ID | 1171322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3818216 |
End bp | 3820003 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637345451 |
Product | ABC transporter, ATP-binding/permease protein, putative |
Protein accession | NP_719206 |
Protein GI | 24375163 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTCAAC AATCTTCTTA CGCCTCGGTT AGCCAGCGGG CGGTGTTACC TTGGATTTGG CAATTTCTTA AGCCCTATCG CCCGCGGGTT GTCGCGGCGA TTGTATTCTT ATTGATCGGT TCTTTGGCTT GGTTATCCCT CGGCCAAGGT GTGCGTTTGA TGGTGGACGA GGGGTTTATT AAGGATAACG CCCAGCGCCT TAATGAGATC ATTCTGTTCG TACTGGTGAT TACTGCTGTG AGTGGCACTG CGGTGTTCTG CCGCTTTTAT CTGATGACAT GGCTTGGGGA GCGTGTCAGT GCCGATATTC GGCTTGCGGT TTACAATCAA TTACTTAAGT TATCTCCGGC GTTTTATGCC AAGGTGCGTA CTGGCGAGGT GATTTCGCGT TTTACCGCCG ATTCCACTTT ACTGCAAACA GTGGTCGGCT CGAGTCTTTC TATGGCACTG CGCTCCGGCG TGACGGTTAT TGGTGGGCTG GCGATGATGG GAATCACCAG CGTGAAGATG ACACTACTGG TGCTACTGGC GGTACCTTTA GTGCTTGGAC CGGTTAGTTT TTTTGGCAGA AAGGTGCGCA CCTTAGCGCG CGAGAGCCAA GATAGGGTGG CGGATCTCGG TGCCTATGTG GATGAAACCT TGCATGAGAT CCACACAGTG CAGGCCTATG GCCATGAGGA TAAGGACCGC AGTTTATTTA ACGGCCGTGT CGAAGATGTG ATGACCGCCG CCAGCGGCCG CATTCGTTAC CGCGCGCTGC TGATTTCATC AGTGATGTTC CTCAGTATTG CCGCTATTGC GCTAGTGACT TGGGTCGGCG CCCACGATGT GATGTCGGGT AAGATGACGG GCGGCGAACT CTCAGCCTTT ATGTTTTATG CCGTGATGGT CGCTGGCGCG GTTGCGACCA TTAGTGAAGT GGTGGGGGAA ATCCAACGCG CCTCGGGCGC CGCCGAACGT TTAATCGAGT TGGCTGAGAC TGAGGTCGAT ATTCCGGCGC CGCTGGTGCC TAAAACTTTG CCCACGAAAG TGCGTGGCGA GCTGCAATTA CATCAGCTGA ACTTCCATTA TCCCGAGCAA ACTCAGTTAG TGCTCAGCGA CTTAAACCTT GTAATAAATG CCGGCGAGCG GGTGGCTTTG GTCGGCCCGA GTGGTGCCGG TAAGAGTACC CTGTTTCAGT TATTGCAGCG GTTTTATGTG CCTTCATCGG GCAGTATCTT ATTGGATGGG ATTGATATTG CTGCGCTTTC ACCACAGGAT TTACGGGCAC AGTTTGCGCT GGTGCCGCAG GATTCGGTTA TTTTTGCCAC CAGTGTGCTG GAAAACGTGC GCTATGGCCG CGTCGATGCT AGCGAGCAAG AAGTGATTGA TGCCTGTATT GCAGCCCGAG CACATGAGTT TATCAGTGAA TTTAGCGAGG GATATCAAAC CTATTTGGGT GAGCGTGGCG TGCGTTTATC TGGCGGGCAA AAACAACGGA TTGCCATTGC GAGGGCCATT TTAGCCGACA GACCCATCCT ATTACTCGAT GAGGCCACCA GTGCACTCGA TGCCTTGAGT GAGCAAAAAG TCAAACAGGC GCTCGATGAG TTAATGGCAG GTAAAACCAC GCTAATCATC GCCCATCGGC TAGCCACCGT AATTAATGCG GATCGGATTA TTGTGTTTGA TAAGGGGCGA ATCGTTGCCA GCGGCAAACA TCAAGATTTA ATTAAAACCA ATGCTTTATA CCGCGAGTTT GCGACTCTGC AGCTATTGAC GGATGAGGCT ATGCCACTGA GTGATTAA
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Protein sequence | MSQQSSYASV SQRAVLPWIW QFLKPYRPRV VAAIVFLLIG SLAWLSLGQG VRLMVDEGFI KDNAQRLNEI ILFVLVITAV SGTAVFCRFY LMTWLGERVS ADIRLAVYNQ LLKLSPAFYA KVRTGEVISR FTADSTLLQT VVGSSLSMAL RSGVTVIGGL AMMGITSVKM TLLVLLAVPL VLGPVSFFGR KVRTLARESQ DRVADLGAYV DETLHEIHTV QAYGHEDKDR SLFNGRVEDV MTAASGRIRY RALLISSVMF LSIAAIALVT WVGAHDVMSG KMTGGELSAF MFYAVMVAGA VATISEVVGE IQRASGAAER LIELAETEVD IPAPLVPKTL PTKVRGELQL HQLNFHYPEQ TQLVLSDLNL VINAGERVAL VGPSGAGKST LFQLLQRFYV PSSGSILLDG IDIAALSPQD LRAQFALVPQ DSVIFATSVL ENVRYGRVDA SEQEVIDACI AARAHEFISE FSEGYQTYLG ERGVRLSGGQ KQRIAIARAI LADRPILLLD EATSALDALS EQKVKQALDE LMAGKTTLII AHRLATVINA DRIIVFDKGR IVASGKHQDL IKTNALYREF ATLQLLTDEA MPLSD
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