Gene SO_3639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3639 
SymbolksgA 
ID1171300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3798650 
End bp3799456 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content49% 
IMG OID637345430 
Productdimethyladenosine transferase 
Protein accessionNP_719181 
Protein GI24375138 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGCA AAGTACATTT AGGCCACACG GCCAGAAAGC GTTTCGGACA GAACTTCTTA 
ACTGACGACA ATGTGATTAA CCGCATTGTG GGTGCGATCG CCCCCGATAA TGACCACGTG
ATGGTGGAAA TCGGTCCAGG CCTTGGCGCC TTAACGGAGC CTGTCGCCAC GGCGATAGAT
AACCTGACCG TTGTCGAGTT AGACCGCGAT CTGGTAGAGC GCTTACAGAA CCACCCAGTA
CTTAAGGATA AGCTCACCAT TCACCAAGGC GATGCGCTGC AGTTCGACTT TAGCCAGTTG
GTCGTGCCGG GTAAAAAACT CAAAGTGTTT GGTAACTTAC CCTATAACAT TTCGACGCCT
TTGATGTTCC ATCTGTTCGA GTTTGCTGAG CAGATTGAAA CCATGCACTT TATGCTGCAA
AAAGAAGTGG TGCTGCGTTT ATCGGCAAGT CCGGGCACGA AAGCCTATGG CCGATTAACC
GTCATGGCAC AATATTTCTG CCAAGTAGTC CCCGTACTCG AAGTACCGCC ACACAGCTTT
GCCCCGCCAC CGAAAGTTGA CTCCGCAGTG GTGCGTCTGT TGCCCTATGC TGAAAAACCT
TTCCCCTGTA AGGATGTGAA TGTGCTGCGT CAGCTGTGCA CCACTGCGTT CAATATGCGC
CGTAAAACGC TTCGCAATAA CCTTAAGCAA GTGTTAAGCG ACGAAGAATT CGAGCAGTTA
GGTATTGATC AAAACCTGCG TCCAGAACAA ATCTCCGTTG AACAATATGT TGCAATGGCG
AATATGGTAT GTGATAAGCA GGCTTAA
 
Protein sequence
MSSKVHLGHT ARKRFGQNFL TDDNVINRIV GAIAPDNDHV MVEIGPGLGA LTEPVATAID 
NLTVVELDRD LVERLQNHPV LKDKLTIHQG DALQFDFSQL VVPGKKLKVF GNLPYNISTP
LMFHLFEFAE QIETMHFMLQ KEVVLRLSAS PGTKAYGRLT VMAQYFCQVV PVLEVPPHSF
APPPKVDSAV VRLLPYAEKP FPCKDVNVLR QLCTTAFNMR RKTLRNNLKQ VLSDEEFEQL
GIDQNLRPEQ ISVEQYVAMA NMVCDKQA