| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3611 |
|---|
| Symbol | |
|---|
| ID | 1171276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 3772222 |
|---|
| End bp | 3773709 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637345407 |
|---|
| Product | AAA family ATPase |
|---|
| Protein accession | NP_719154 |
|---|
| Protein GI | 24375111 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACA TTCGCGATTT AACCGCTGTA CTACGCTCTA AAACGCCCAT CGTTGTGATT
GAAACCTATG AAGAATATCG TGTTGTTGAC ATGCTTAAGC GAATCGCGAA TGTACTCTAT
CAGCCGCTAT TTACTTGGAG TATTACCCAA GGACTCACGC GGGTTGATAA GCCGATGCCA
GCACAGAAAT TTAATACTGA ACCCGGCGAC ATCTTGGGGC AGATTAAAGC GACGACCCAG
CAGGGGATTT ATGTGCTCTG TGACTTTCAC CCCTTTGTGG TGGAGGCGCC CAAGAATGTC
CGCCTACTGA AAGAAATCGC TCTCGAATAC GATGCTTTGC AACATACCTT AGTGCTGGTC
AGTCATGCCT TTGAGATCCC GCCGGAAATT AAACGTTACT GCGCCTATTT TCAGCTGACT
TTGCCGAGCA CTTCGCAGCT TGAGAACCTG ATTTATCTTG AGGTGGATAA GGTGCGCACC
CAAGGCATAC CATTGAATGT GGATGATAAG GCTGTGGTTA AACTAGCGGA AAACCTGCGC
GGTGTGACCT TAGATGATGC CAGACGATTG ATCCATAAAG CGATTGTTGA TGATGGCGCC
ATTACTCACT CAGATGTGGA TCTGATTAAC AAAGCCAAAT TCCAGTTGCT CGATCTTAAC
GGCATATTGC AATTTGAGTA TGACACCAGT GATTTTTCGC AGATTGCCGG ATTACATAAT
CTCAAAAAAT GGTTAAAGCA GCGCGCGCCA GCGGCACATA GTCCCCAAGG AGTGAGTGCC
GCCGCCCAGA TCGATACCCC AAAGGGCGTG TTATTACTCG GTGTGCAGGG CAGTGGCAAG
AGTCTCGCGG CCAAAGCAGT GGCGGGCGTA TGGCAACGAC CACTGCTTAG ACTCGATATG
GGCGCCTTAT ATAACAAATA CATAGGCGAA ACCGAGAAGA ATCTACGCAA TGCCCTCGAA
CTGGCCGATA TGATGTCGCC CTGTATCCTA TGGATAGATG AAATTGAAAA GGGCTTAAGC
GGCAGTAACA GTGATCAAGG CATATCCACC CGTATCCTTG GAACCTTATT AACTTGGATG
GCCGAGCGCA AATCCGAGGT GTTTGTGGTG GCTACAGCCA ACGATATTCA AGCCCTGCCG
CCAGAACTGA TGCGTAAAGG GCGAATGGAT GAAATCTTTT TTGTTGATTT ACCCGACGAA
ACCATCCGCA AGGCGATTTT CTTGATCCAT TGCCAGCGCC GCGGTATTGA TGTTAGCCGT
CTCGACCTCG CCCAACTTTC GCGCCATAGC CAAGGGTTTT CGGGCGCAGA AATCGAGCAG
GCAGTTATCG CCGCCATGTA CAGTGCCCGC AGTTTAGGAC GCACACTCGA CCAAGACTTA
CTGCTAGAAG AACTAACTAA AACCAGACCG TTATCGATTG TGATGGGCGA TAAGATAAAT
GCCCTCAGGC AATGGGCCGC AGGGCGCACA GTCAATGCCC ATGAATAA
|
|---|
| Protein sequence | MQDIRDLTAV LRSKTPIVVI ETYEEYRVVD MLKRIANVLY QPLFTWSITQ GLTRVDKPMP
AQKFNTEPGD ILGQIKATTQ QGIYVLCDFH PFVVEAPKNV RLLKEIALEY DALQHTLVLV
SHAFEIPPEI KRYCAYFQLT LPSTSQLENL IYLEVDKVRT QGIPLNVDDK AVVKLAENLR
GVTLDDARRL IHKAIVDDGA ITHSDVDLIN KAKFQLLDLN GILQFEYDTS DFSQIAGLHN
LKKWLKQRAP AAHSPQGVSA AAQIDTPKGV LLLGVQGSGK SLAAKAVAGV WQRPLLRLDM
GALYNKYIGE TEKNLRNALE LADMMSPCIL WIDEIEKGLS GSNSDQGIST RILGTLLTWM
AERKSEVFVV ATANDIQALP PELMRKGRMD EIFFVDLPDE TIRKAIFLIH CQRRGIDVSR
LDLAQLSRHS QGFSGAEIEQ AVIAAMYSAR SLGRTLDQDL LLEELTKTRP LSIVMGDKIN
ALRQWAAGRT VNAHE
|
|---|
| |