Gene SO_3604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3604 
Symbol 
ID1171270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3766386 
End bp3767588 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content43% 
IMG OID637345401 
ProductISSod4, transposase 
Protein accessionNP_719147 
Protein GI24375104 
COG category[L] Replication, recombination and repair 
COG ID[COG3328] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAAC CTTTTAACTT CGAACAAGCC CTTAAAGATC TGCAATCAGG TAAAAGCCTC 
ACAGGTAAAG ACAGCATTCT TGGCCCACTG ATCAAGCAAC TCACTGAAGC GGCTCTCCAG
GCTGAGCTTG AGCAGCATTT AGCGCATGAT CCTCAGCCTA ATCGTAAAAA TGGCAAAACC
CCTAAGACCA TTAAGCATCC GTCCGGTAAC TTTGAGTTAG ACGCGCCTAG AGACCGCAAT
GGCACCTTTG AGCCTCAGTT GATTAAGAAA AATCAAACTA CACTAACCGA TGAAATCGAA
CGTAAAGTGT TATCGATGTT CAGTATAGGT ATGAGCTATC GCGATATTAA TCAACATGTT
GAAGATATGT ATGGGCTCAA TGTGTCTAAC GCAACAGTAA GCGCCATCAC CGACAAACTC
ATCCCCGAAC TTAAAGCGTG GCAACAGCGC CCATTAGATA GCCATTATCC TATCGTTTGG
CTTGATGCGA TACATTATAA AGTCAAAGAG GATGGGCGTT ACGTCAGTAA AGCCGTTTAC
ACATTGTTAG CGCTTAATAT GAAAGGAAAA AAGGAAATTT TAGGGCTTCA CTTATCCGAA
AATGAAGGCG CTAATTACTG GCTATCCGTA CTGRCCGATC TTAATAATCG TGGTGTAAAA
GATATTCTTA TCGCCTGTGT TGACGGCTTG ACCGGTTTCC CTGAGGCCAT AGCCAGTATC
TTCCCTCATA CGGAAACACA GCTATGCGTT ATCCACCAGA TCCGCAACTC AATGAAGTAT
GTCGCCTCAA AAAATCAGAA AGCGTTTATG GCTGATTTAA AGCCTGTGTA TCGAGCCGTG
AGTAAAGAAG CCGCAGAGAT GGCCTTGGAC GAACTGGAGG CCAAATGGGG TGATGCTTAT
CCGTTGGTAA TCAACTCTTG GCGTCGCAAA TGGCATAATT TGTCCCATTA TTTTAAGTAC
CCAGAACATA TCAGGAAAGT GATTTACACG ACCAATGCGG TTGAGGCTGT GCATCGCCAA
TTTAGAAAGC TCACCAAAAC CAAAGGTGCA TTTCCTAATG AAAATAGCTT GTTGAAGCTA
CTTTACGCAG GCATATTAAA CGCCTCAGAT AAATGGACTA TGCCAATCCA CAATTGGAGC
CTTTGTTTAT CTCAGTTAGC GATTTATTTT GAAGGACGTT TAGATAGCGT GCTAGAAATT
TAA
 
Protein sequence
MTQPFNFEQA LKDLQSGKSL TGKDSILGPL IKQLTEAALQ AELEQHLAHD PQPNRKNGKT 
PKTIKHPSGN FELDAPRDRN GTFEPQLIKK NQTTLTDEIE RKVLSMFSIG MSYRDINQHV
EDMYGLNVSN ATVSAITDKL IPELKAWQQR PLDSHYPIVW LDAIHYKVKE DGRYVSKAVY
TLLALNMKGK KEILGLHLSE NEGANYWLSV LXDLNNRGVK DILIACVDGL TGFPEAIASI
FPHTETQLCV IHQIRNSMKY VASKNQKAFM ADLKPVYRAV SKEAAEMALD ELEAKWGDAY
PLVINSWRRK WHNLSHYFKY PEHIRKVIYT TNAVEAVHRQ FRKLTKTKGA FPNENSLLKL
LYAGILNASD KWTMPIHNWS LCLSQLAIYF EGRLDSVLEI