| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3603 |
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| Symbol | |
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| ID | 1171269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3765217 |
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| End bp | 3766353 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345400 |
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| Product | HlyD family secretion protein |
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| Protein accession | NP_719146 |
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| Protein GI | 24375103 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACAGA ATTATGAACA CTACCTTTGC ATTGTGATTT TTAAAGTCTT TAAGATCCCG
ATGAACAAAT GGACTGTGCC AACCGCGGTA TTAGGCGGTG TGTTCCTGAT CGGGGCGTTA
TTACTGATCA TGAACTACAA CCACCCTTAT TCGCGTTTTG CGCGGGAATA CTATGTCACT
ATCCCTATCA CGCCAGCCGT TAAAGGATTA GTGATTTCGG TTGATGTCAA ACCTAATACG
TTTATCAAAC AAGGTGATGT GTTATTCCGT ATCGACCCAA CACCCTATCA AGCGGTTGTT
AAAACCAAAA AAGCTGCGTT GTTGGCGGCA GAGCAAGAGG TTCCTCAACT CAAGGCGGCT
TGGGAATCTG CCAAGGCAAA CGTGGCAAGA GTGGCAGCAG ATAGAGAGCG CAATAAGTCG
GCCTATGATC GTTATGAGCA AGGTCATCGT AAAGGGGGCG CTAATTCTCC TTTCACCGCG
CTTGAATTAG ACAATAAACG GCAACTGTAT CTAGCTTCTG ATGCACAATT GACCGCGGTG
CAAGCGGAAG AGTTACGTGC GCGTCTTGCC TATGAGTCAA ATGTGGATGG TGTGAACTCA
AAGGTTGCCG GACTGCAGGG TGATCTTGAG AATGCCCTAT ATAATTTGGA ACAAACCGTG
GTGCGCGCTC CAGCCGACGG CATAGTAACC CAAATGGCGC TTCGCCCAGG GGCGATGGCG
GTTCCTTTAC CTTTACGCCC AGTGATGAAT TTTATCCCCG ATGAACAACG GTATTTTGCC
GGTGCGTTTT GGCAAAATTC ACTGCTGCGT TTACAGGAAG GCGATGAAGC AGAAGTGGTG
CTAGATGCCG TACCTGGTAA GGTATTTAAG GGTAAAGTCG CTAAGGTTTT ACCTGCGATG
GCCGAAGGGG AAATTCAGAT GAATGGCACG CTACAGTCTT CGAATCAGCT GTTTCAAACT
GGACGAGTCA TTGTCTTGAT TGATATTGAG GACGATGCGA TACGCCGTGA GTTCCCAGCG
GGGGTTGCTG GACAAGTGGC TGTGTATACA GAGCATTTTC ATCATGTGGC TGTGATGCGT
AAAGTGCTGC TGCGGATGCA GGGTTGGTTA AATTACCTGT TCTTCGATGG TCACTAG
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| Protein sequence | MTQNYEHYLC IVIFKVFKIP MNKWTVPTAV LGGVFLIGAL LLIMNYNHPY SRFAREYYVT
IPITPAVKGL VISVDVKPNT FIKQGDVLFR IDPTPYQAVV KTKKAALLAA EQEVPQLKAA
WESAKANVAR VAADRERNKS AYDRYEQGHR KGGANSPFTA LELDNKRQLY LASDAQLTAV
QAEELRARLA YESNVDGVNS KVAGLQGDLE NALYNLEQTV VRAPADGIVT QMALRPGAMA
VPLPLRPVMN FIPDEQRYFA GAFWQNSLLR LQEGDEAEVV LDAVPGKVFK GKVAKVLPAM
AEGEIQMNGT LQSSNQLFQT GRVIVLIDIE DDAIRREFPA GVAGQVAVYT EHFHHVAVMR
KVLLRMQGWL NYLFFDGH
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