| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3599 |
|---|
| Symbol | cysP |
|---|
| ID | 1171265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 3761060 |
|---|
| End bp | 3762067 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637345396 |
|---|
| Product | sulfate ABC transporter, periplasmic sulfate-binding protein |
|---|
| Protein accession | NP_719142 |
|---|
| Protein GI | 24375099 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4150] ABC-type sulfate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTAA AACTCACTAA GGCCCTGCTG GGAACCCTAT TACTGGGAGC CTCCCTCAAT
GTCGCAGCCG CCGATCAGAC CTTACTTAAT TCCTCTTACG ATATATCACG GGAATTATTT
AACGCCTATA ACCCCGTATT TGCTAAACAT TGGCAAGAAA AAACCGGTAA AACGGTTGAA
ATCAAACAAT CCCACGCGGG TTCTTCAGCT CAGGCTCGCT CGATTCTGCA GGGCTTACCA
GCGGATGTGG TGACCTTTAA CCAAGTCACA GATGTGCAAA TTCTGCATGA TCGCGGCAAG
TTGATCCCAG AAAACTGGCA ACAATTACTG CCTAATGCGA GCTCACCTTA CTATTCAACC
ATTGCGTTTT TAGTCCGCAA AGGTAACCCA AAGCAAATTA GCGACTGGGG TGATTTAGCC
AAAGATGACG TCAAGCTAGT ATTCCCTAAC CCAAAAACCT CAGGTAATGC TCGCTACACT
TATTTAGCCG CCTTAGGTTT TGCCCAAAAA AACTATGGTA AAGATAATGA GGCTTCTTTA
GATGCATTTT TGAAAAAGTT CCTTGGCAAC GTCGCCGTGT TTGACACAGG TGGCCGCGGT
GCAACCACCT CGTTTGTTGA GCGTGGCATC GGTGATGTGC TAATTACCTT CGAATCTGAA
GTAAACAATA TTCGCCAGCA ATATGGTGCT GATGGTTATC AAGTTGTAGT GCCAAAGACT
TCGATTCTAG CGGAATTCCC TGTTGCGGTT GTGGAGAAAA ATGCCAAGCG CAATGGCACA
CAGGAGTTAG CGACTGAGTA TCTAAGCTAT CTCTACAGCG AAGAGTCACA ACGTTTGTTG
GCTGGGTTTA ACTACCGCGT TCACAACGAA AAGGTGATTG CCGAATTTAC CAAGCAATTC
CCGACGGTAG AGTTGATGAC GGTCGAGCAA ATCATCGGTA ACTGGGACAA CGCCATGAAG
ACGCAATTTG CCAATGGTGC CAAACTGGAT CAGTTATTAA AACGCTGA
|
|---|
| Protein sequence | MPVKLTKALL GTLLLGASLN VAAADQTLLN SSYDISRELF NAYNPVFAKH WQEKTGKTVE
IKQSHAGSSA QARSILQGLP ADVVTFNQVT DVQILHDRGK LIPENWQQLL PNASSPYYST
IAFLVRKGNP KQISDWGDLA KDDVKLVFPN PKTSGNARYT YLAALGFAQK NYGKDNEASL
DAFLKKFLGN VAVFDTGGRG ATTSFVERGI GDVLITFESE VNNIRQQYGA DGYQVVVPKT
SILAEFPVAV VEKNAKRNGT QELATEYLSY LYSEESQRLL AGFNYRVHNE KVIAEFTKQF
PTVELMTVEQ IIGNWDNAMK TQFANGAKLD QLLKR
|
|---|
| |