| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3598 |
|---|
| Symbol | cysM |
|---|
| ID | 1171264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 3759961 |
|---|
| End bp | 3760827 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637345395 |
|---|
| Product | cysteine synthase B |
|---|
| Protein accession | NP_719141 |
|---|
| Protein GI | 24375098 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTATTG AAGCCTGTAT CGGGCAAACG CCGCTAGTTC GCCTGCAGCG GCTTGATTGC
GGTAGCTCAA CCGTGTTGTT AAAGCTGGAG GGGAATAATC CTGCTGGCTC GGTAAAGGAT
CGCGCCGCAC TGAATATGAT TAATCAGGCG GAGCTTCGCC AAGAAATCGC CCCAGGTGAT
ACCTTGATTG AAGCCACAAG TGGTAATACA GGAATTGCCT TAGCGATGGC TGCGGCCATT
AAAGGTTACA AGATGATCCT GATTATGCCG TCCAATTCGA CCCAAGAGCG TAAAGATGCC
ATGCAGGCTT ATGGTGCCGA GCTGCTGCTG GTGGACAACA TGGAAGCCGC GCGGGATTTG
GCCTTAGCGC TTCAGGCTGA AGGGAAGGGC AAGGTACTGG ATCAGTTTAA TAATCAAGAT
AATGCTAACG CGCATTTTCT CACTACTGGC CCCGAAATTT GGCAGCAGAG CCAAGGTAAG
ATCACCCATT TTGTTTCTAG CATGGGGACC ACTGGTACTA TTATGGGCGT GTCGAAATAC
CTAAAGAGTC GCAATCCCGA TATTACCATT GTCGGTCTTC AACCCGCCGA TGGCAGTTCG
ATTCCGGGCA TTCGCCGTTG GCCGCAGGAA TATTTACCAG GCATCTTTGA TGCCGCCCGT
GTCGATTTAA TGATGGATAT CGAAGAGCAA GACGCCAAAG CCATGGCTCG AGCCTTAGCG
CGAGAAGAGG GCATTTGTGC TGGTGTGAGT TCTGGCGGCG CGGTATATGC AGCACTTGAG
TTAGCAAGGC AGTATCCAGG CTCTGTAGTG GTCGCGATTG TGTGTGATAG GGGCGATCGT
TATCTGTCAT CTGGGTTATT TTCTTAA
|
|---|
| Protein sequence | MTIEACIGQT PLVRLQRLDC GSSTVLLKLE GNNPAGSVKD RAALNMINQA ELRQEIAPGD
TLIEATSGNT GIALAMAAAI KGYKMILIMP SNSTQERKDA MQAYGAELLL VDNMEAARDL
ALALQAEGKG KVLDQFNNQD NANAHFLTTG PEIWQQSQGK ITHFVSSMGT TGTIMGVSKY
LKSRNPDITI VGLQPADGSS IPGIRRWPQE YLPGIFDAAR VDLMMDIEEQ DAKAMARALA
REEGICAGVS SGGAVYAALE LARQYPGSVV VAIVCDRGDR YLSSGLFS
|
|---|
| |