Gene SO_3588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3588 
Symbol 
ID1171256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3753539 
End bp3754108 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content45% 
IMG OID637345387 
Productgpr1/fun34/yaaH family protein 
Protein accessionNP_719131 
Protein GI24375088 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGACAA AACTGGCGAA TCCTGCTCCA TTAGGTTTAA TGGGCTTTGG TATGACGACT 
ATCCTGCTAA ACATTCATAA TGCAGGGTAC TTTCCGATTG ACTCGATGAT TTTAGCTATG 
GGGATTTTCT ATGGCGGACT GGGTCAAATT ATCGTGGGTA TTATGTGTTT TATGCGCGGT 
GATACCTTCG GCACAACTGC CTTTACCTCT TACGGTTTAT TCTGGTTGAC CTTAGTTGGG 
CTTATTTTGA TGCCAAATGC TGGGGTTGCG GCGAGCCCAA GCTATTTTAT GGGGTGGTAC 
TTAACCCTTT GGGGAATTTT TACAGCCTTT ATGTTTGTGG GATCGTTACG TTATCCAAGG 
GCTAAGCAGT TTGTGTTTGC CTCACTGACG ATTCTATTTT TCCTCCTCGC GGCAAGAGAT 
TTTACTGGCA GCGCTCTAAT TGGCACTATC GCGGGTTTTG AAGGAATTAT TTGTGGCGCG 
AGTGCAATTT ACTTTGCCAT GGCGCAAGTG CTTAATAATG AATATGGCCG CACGATTTTG 
CCTATAGGTG AGCTTAAGGC AAAGGCCTAA
 
Protein sequence
MSTKLANPAP LGLMGFGMTT ILLNIHNAGY FPIDSMILAM GIFYGGLGQI IVGIMCFMRG 
DTFGTTAFTS YGLFWLTLVG LILMPNAGVA ASPSYFMGWY LTLWGIFTAF MFVGSLRYPR 
AKQFVFASLT ILFFLLAARD FTGSALIGTI AGFEGIICGA SAIYFAMAQV LNNEYGRTIL 
PIGELKAKA