| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3580 |
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| Symbol | |
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| ID | 1171249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3746988 |
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| End bp | 3747794 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637345377 |
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| Product | hypothetical protein |
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| Protein accession | NP_719124 |
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| Protein GI | 24375081 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAAAT TCTTAACTAC AACTTATAAA GAATTGAATT CAAGTATGTA TAAATTCTCC
AAAGGCTTAA CCTTAGTCCT ATTTTCACTA GCGTTATCAG CCTGTAGTAG CAGTCCTGAA
GATAACGACA TTGCCGCCAA AACCTCACCT GACGAACTTT ATTCTCAGGC AAGAACCTCC
ATGGAGCTTG GCAATTACTC TAAAGCTGTC CGTTCATTGG AGGCGTTAGA CTCTCGCTTC
CCGTTCGGAC CACATAAAAC TCAGGTACAA TTAGATCTGA TTTATGCTTA TTACAAAATG
GACGATGTTG CCTCTGGTAT TGCCAACATT GACAGATTCA TCCGTTTAAA CCCAACTCAC
CCCAATATCG ACTATGTCTA CTATATGCGA GGACTCGTCA ATATGCAGGC GGATAGCTAT
TTATTCCATG ATATGTTGAA TATCGATAGA ACCGATCGCG ATCCCAAAAA TGCCCAAGAC
GCCTTTAAGG ATTTTGATCG TCTAATCAAA ACCTACCCCA ACAGCAAATA TGCCGCCGAT
GCGCAAAAAC GCATGTTATC GCTGAAAAAC CGTTTAGCAA AATACTCCAT TCAAGTTGCT
GAATACTATA TCAAAATGAA TGCTTGGAGT GCTGCGGCCG TTCGTGCACA ATCTGTGTTA
GAAACGTATC CCGGTACACC GTCAACTGAG CGAGCACTGG AGATTATGGC AGAAGCTTAT
GGCGAGTTAG GTCAGAACCA ACTGAAGCAA AACGTGCTAA TGGTAATGCA AGCTAACTTC
CCAAACAATG AAATCTTATC AAACTAA
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| Protein sequence | MEKFLTTTYK ELNSSMYKFS KGLTLVLFSL ALSACSSSPE DNDIAAKTSP DELYSQARTS
MELGNYSKAV RSLEALDSRF PFGPHKTQVQ LDLIYAYYKM DDVASGIANI DRFIRLNPTH
PNIDYVYYMR GLVNMQADSY LFHDMLNIDR TDRDPKNAQD AFKDFDRLIK TYPNSKYAAD
AQKRMLSLKN RLAKYSIQVA EYYIKMNAWS AAAVRAQSVL ETYPGTPSTE RALEIMAEAY
GELGQNQLKQ NVLMVMQANF PNNEILSN
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