| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3577 |
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| Symbol | clpB |
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| ID | 1171246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3742470 |
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| End bp | 3745043 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345375 |
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| Product | clpB protein |
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| Protein accession | NP_719122 |
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| Protein GI | 24375079 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACTCG ATCGTATGAC CAATAAATTT CAGCTTGCCA TCTCAGATGC CCAGTCGTTA
GCTCTTGGGC GTGATCATCA GTTTATCGAA CCGCTACATT TGATGATGGC GCTGCTCAAC
CAGGATTCTG GTTCTATCCA TCCTTTATTA ACCCAAGCTG GTATTCGGGT GAGTGCATTG
CGTTCGCTTT TGAGCCAAGA GCTTGAGCGT CTTCCCCAAG TTGAAGGCAC TGGCGGCGAT
GTACAGTTAT CCCAAGGGTT AATTCGTTTA TTAAACCTTT GCGATAAATT GGCGCAAAAG
CGTAAAGACA AATATATCTC CAGCGAATTG TTCGTTCTCG CGGCGCTTGA GGGCTGCGAT
GCACTAGCGC AATGCCTCAA AAAATCCGGC GCGACCAAAG AGCTGATGGA ACAAACCATT
GAGCAAGTGC GTGGTGGGCA AAAAGTGGAT GATCCCAATG CGGAAGATCA ACGCCAAGCG
CTGAAAAAGT TTACCGTCGA TCTTACTGAA CGTGCTGAGC AGGGCAAACT CGATCCTGTG
ATTGGCCGTG ATGATGAAAT TCGTCGCACG ATTCAAGTCT TGCAACGTCG AACTAAAAAT
AACCCTGTGC TTATTGGTGA GCCTGGGGTG GGTAAAACGG CCATTGTCGA AGGGCTTGCT
CAGCGGATTG TGAACGGTGA AGTACCTGAA GGTATTAAAA ATAAACGTGT TTTATCCTTA
GATATGGGGG CATTAATTGC GGGCGCTAAA TACCGGGGAG AGTTCGAGGA GCGTTTAAAA
GCCGTGCTTA ACGAGCTGGC GCAGGAAGAA GGCCAAGTGA TCCTCTTTAT CGACGAGCTA
CACACTATGG TGGGCGCGGG CAAGGGCGAT GGCGCAATGG ATGCGGGCAA TATGTTAAAA
CCTGCTTTGG CTCGTGGCGA TCTCCACTGC GTAGGGGCTA CTACTCTCGA CGAGTATCGC
CAATATATTG AAAAAGATGC CGCCCTTGAG CGTCGTTTCC AAAAAGTATT AGTGGATGAG
CCAAGCGTTG AAGACACCAT CGCGATTTTG CGTGGCTTGA AAGAGCGTTA TGAGCTGCAT
CACCATGTGG AAATTACCGA TCCAGCGATT GTGGCGGCGG CGACGATGTC GCACCGTTAT
GTGTCGGATC GTAAATTACC TGATAAAGCC ATCGATTTAA TTGACGAAGC GGCATCGAGC
ATCCGTATGC AGATGGATTC CAAGCCTGAA TCCCTCGACA GGCTCGAACG TCGTGCTATC
CAGCTCAAAC TGGAGGAGCA AGCGTTAGCC AAAGAAAATG ATGAGGCGAG TCGTCGAAGG
CTAGATCATT TGCAAGAGGA ATTGCGTGAC GTTGAAGCTA AGGCTTCTGA GCTGAGCGAA
ATCTGGCGTA CCGAAAAGGC TGCCCTTGCT GGTACTCAGC ATATTAAAGC CGATTTGGAA
CAAGCGCGGC TGGACTTAGA AGTCGCGCGC CGCGCAGGTG ATTTAACTCG TATGTCTGAA
TTGCAATATG GCCGCATTCC AGAGCTTGAA AAGCAGCTGG ATTTAGCATC GCAAGCTGAA
ATGCAGGATA TGACCCTGCT GCGTAATAAA GTCACCGACT TAGAAATTGC CGAAGTATTG
TCTAAGGCAA CGGGTATTCC TGTGTCTAAG ATGCTCGAAG GCGAGCGTGA AAAACTGTTG
CAGATGGAAG TGGCATTACA TGAGCGTGTG ATTGGCCAAA ATGAAGCTGT AGATGCGGTC
GCCAATGCGA TTCGTCGCAG CCGAGCTGGG CTTGCCGATC CAAATCGCCC GATTGGTTCG
TTCCTGTTTT TAGGACCAAC TGGTGTGGGT AAAACTGAGC TGTGTAAGTC GTTAGCTAGA
TTCTTATTTG ATAGTGAATC AGCCTTAGTG CGCATCGACA TGTCCGAGTT TATGGAAAAA
CATGCAGTTT CACGTTTGGT TGGTGCTCCT CCTGGATATG TTGGTTATGA AGAGGGCGGT
TACTTAACTG AAGCAGTTCG TCGTAAGCCT TATTCAGTGA TTTTGCTCGA TGAGGTGGAA
AAGGCGCACC CTGACGTGTT CAACATTTTG CTGCAAGTAT TGGATGATGG CCGCTTAACC
GATGGTCAAG GTCGCACTGT CGACTTTAGA AATACGGTGA TCATCATGAC CTCGAACTTA
GGTTCCGACA TTATCCAAGA AGGATTCGGC CATTTAAGTT ACAGCGAAAT GAAGAGCGCG
GTGATGAATG TGGTGACCCA TAGCTTTAGA CCCGAGTTCT TAAACCGGAT CGATGAGTCT
GTGGTATTCC ATCCCTTGGA TGCAGAAAAT ATCAAGCATA TTGCTTCTAT CCAAATTGCT
TCATTGCGTA AGCGTTTGGC AGAGAAAGAC TATACCCTGG AGATCACCGA CGAGGCATTA
TCGTTGATCG CAGAAATTGG TTTCGACCCT GTCTATGGTG CAAGACCACT AAAACGAGCC
TTGCAACAAG AGATGGAAAA TCCGCTAGCG CAAAAACTAC TGCGTGGTGA TTTGCTACCC
GGCAAACCTA TCAAGGTCAG CTGTGTGGAT GGTGAACTGG TATTTGAGCA ATAA
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| Protein sequence | MRLDRMTNKF QLAISDAQSL ALGRDHQFIE PLHLMMALLN QDSGSIHPLL TQAGIRVSAL
RSLLSQELER LPQVEGTGGD VQLSQGLIRL LNLCDKLAQK RKDKYISSEL FVLAALEGCD
ALAQCLKKSG ATKELMEQTI EQVRGGQKVD DPNAEDQRQA LKKFTVDLTE RAEQGKLDPV
IGRDDEIRRT IQVLQRRTKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE GIKNKRVLSL
DMGALIAGAK YRGEFEERLK AVLNELAQEE GQVILFIDEL HTMVGAGKGD GAMDAGNMLK
PALARGDLHC VGATTLDEYR QYIEKDAALE RRFQKVLVDE PSVEDTIAIL RGLKERYELH
HHVEITDPAI VAAATMSHRY VSDRKLPDKA IDLIDEAASS IRMQMDSKPE SLDRLERRAI
QLKLEEQALA KENDEASRRR LDHLQEELRD VEAKASELSE IWRTEKAALA GTQHIKADLE
QARLDLEVAR RAGDLTRMSE LQYGRIPELE KQLDLASQAE MQDMTLLRNK VTDLEIAEVL
SKATGIPVSK MLEGEREKLL QMEVALHERV IGQNEAVDAV ANAIRRSRAG LADPNRPIGS
FLFLGPTGVG KTELCKSLAR FLFDSESALV RIDMSEFMEK HAVSRLVGAP PGYVGYEEGG
YLTEAVRRKP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVIIMTSNL
GSDIIQEGFG HLSYSEMKSA VMNVVTHSFR PEFLNRIDES VVFHPLDAEN IKHIASIQIA
SLRKRLAEKD YTLEITDEAL SLIAEIGFDP VYGARPLKRA LQQEMENPLA QKLLRGDLLP
GKPIKVSCVD GELVFEQ
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