Gene SO_3561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3561 
Symbol 
ID1171232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3721870 
End bp3722295 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content47% 
IMG OID637345360 
Producthypothetical protein 
Protein accessionNP_719108 
Protein GI24375065 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACT TGATTATCAT GTTTTCGGGG GCCTTTTTGG CGGCCACCTT GTTACCGGGG 
GGATCTGAAG TTTTACTGGT CGGCCTGTTA AATAAAGTCC CGCAAGCCTG GCTATCATTA
GTCGCCGTAG CCAGTATGGG TAATACCTTA GGGGCGATGA CGAGTTTTTA TCTCGGGCGT
TTAGGGCGGT TTGCTAAATC CCCAGAGGCG TTGAGTGAGG GCAAACACGC TAAAGCGTTA
ACGTTAATTG AGCGTTATGG TGTGTGGTCA CTATTACTGT CGTGGGCACC GATTATCGGG
GATGTCTTAT GCTTATTAGC TGGTTGGTTA AAGCTCCCAA TGCGACTCGC ATTAATCGTG
ATTTTTATCG GTAAAACCGT TCGTTATCTT GTAGTTGCCG CTGCAACATT ACATTGGCTT
GGTTGA
 
Protein sequence
MSDLIIMFSG AFLAATLLPG GSEVLLVGLL NKVPQAWLSL VAVASMGNTL GAMTSFYLGR 
LGRFAKSPEA LSEGKHAKAL TLIERYGVWS LLLSWAPIIG DVLCLLAGWL KLPMRLALIV
IFIGKTVRYL VVAAATLHWL G