| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3560 |
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| Symbol | |
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| ID | 1171231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3718879 |
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| End bp | 3721728 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637345359 |
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| Product | M16 family peptidase |
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| Protein accession | NP_719107 |
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| Protein GI | 24375064 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAGG GGAATACTTT GAAAAGATGG ATATTAGCCG TCGCGATTTC CGCGGCTCTT
GCAGGTTGTG CCACCGAAAC CTCAACCAAA TTACCCGCAG GCGTAACGTT AATTGAAAAT
GTGCAATTGA CGGACTCTCA AGTCGGTATT CCCTATAAAA AATATCAGCT TGCCAATGGC
CTTACCGTGA TTTTGCATCA GGATCGCTCA GATCCTTTAG TACACGTCGA TGTGACCTAT
CATGTCGGCT CAGCCCGTGA ACTCGCTGGT CGCTCTGGGT TCGCCCATTT GTTTGAACAT
ATGATGTTCC AAGGTTCGGA GCATGTTGCC GATGAGCAAC ATTTTGAGGT GGTGACTGAG
GCGGGCGGCA CGCTTAATGG CTCCACCAAT ACCGATAGAA CCAACTATTT TGAAACCGTG
CCCAACAATC AGCTTGAGAA AATGCTCTGG CTTGAGTCTG ACCGTATGGG CTTTTTATTG
CCAGCACTGA CCAGTGAAAA ATTTGAAGTA CAGCGCGAGA CGGTAAAAAA TGAGCGCGCT
CAGCGGATTG ATAATCAACC CTATGGTCGA ATGAGCGAGC GCTTTAATCA GGCCATGTTC
CCTGTCGGGC ATCCATACTC TTGGCCTGTG ATTGGCTGGC CAGAGGATCT TAACCGCGCG
ACAGTGGATG ATGTGAAGCA CTTTTTCCAG CGTTGGTACG GTCCTAATAA TGCCACACTG
ACCATTGGTG GTGATTTCGA TGAGCTGCAA GCCTTGGCTT GGGTCAATAA ATACTTTGGT
GAAATTCCCC GTGGTCCAGA GGTTCAGCCC GAGCCTAAGA CCTTAGTTAC GATTGATAAA
ACGCGTTATC TCTCAATGGA AGATAACGTA CATTTACCCT TGATCCGTAT TGGTTTTCCG
ACTGTGTATG CCAACCATCC CGATGAGGCG GCGCTGGATT TGTTAGCTAA CATTTTGGGC
GGCGGTAAAA CCTCTTTAGT CTATAAAAAT TTGGTCAAAG ATGGCTATGC TGTGCAGGCT
AGTGTGAGCC AACCCTGTCA AGAGTTGGCG TGTCAGATGT CGATTTATGC CTTAGCCAAT
CCGCAAAAAG GGGTTACCCT TGCCGAACTT GAGCAGCGCA TTTTAGCCTC GATTAATGAG
TTTGAGCAGC GCGGTGTGAC CGACGACGAT TTGCAAAAAG TCAAAGTGCA ATTTGAGGCC
GATACCATTT TTGGTCTGCA AAGTGTCAAA GGTAAAGTGT CTAACTTGGC GCTTAATCAA
ACCCTGTTTG GTAAGCCCAA TAAGATTGCT TCCGACCTTG CTCGTTACGC TAACGTTACT
AAAGACGATG TGATGCGCGT ATTTAAAAAA TACATCAAAG ACAAACCTAT GGTGGTGATG
AGTGTGGTGC CGCAGGGGAT GACTGCGTTA GTTGCCCATC CTGATAACTT CATTGCGCAA
ATGCTGCCAG TCGCCCAAAC GGCGGTTGAA GGTGAATTGC CTAACGCTAA ATTGGTTTCA
AGCTTTGATC GTTCAAAAAT GCCCGCAACG GGTGCCGCGT CTGTGCTTAA AGTGCCGCAA
ATCTGGACCA GCAAGTTAGC CAACGGCATT GAAGTGATGG GCACTCAAAG CATTGAGACT
CCAACAGTTG AGTTGGTGAT TTATCTTAAT GGTGGTCATC GATTAGTCCC CGTCGAAAAG
GCGGGACTGG CAAGTTTAAC CGCAGAAATG CTCAATGAAT CGACCCAAAA ACGTAGCAGC
GAGCAATTGT CGCAGGCGCT CGAGGTGTTA GGCAGCACGG TCGATTTTAG TGCATCGGAG
TATCAAAGCA CGATTAAGGT CTCTGCGCTC ACTGAGCATT TGGATGAAAC CTTAGCCATT
TTAGAAGAAA AGCTGTTTGA ACCAGCCTTC AATGAGGCTG ATTTTGCTCG GGTGAAGCAG
CAACAACTCC AGCAAATTCA GCATATGCAG TCGAATCCGA GTTATCAGGC CAGTGCGGCG
CTGTATAGCT TGCTCTATGG TAATAATAAC GCCCTTGGGG TCAGTGATAC GGGGACCTTA
GATTCAGTCG CGGCACTGAC ACTCGCGGAT GTGCAGGCGT TTTATGCCGA GCAATACCGT
GGTGCTAATG CCAAAATCAT TACCGTGGCG AATCTTCCCG AAACTGCGTT GTTACCAAAA
CTTGCAGGAT TAAGCCAATG GCAAGGTGAG GCTAGCGTAT TGCCGCCGCT CAAATCATTC
CCTGCGCTTA AAGGGGGGAT CATTTACCTG ATTGATAAGC CGGGGGCTGC TCAGTCGGTG
ATCAATATAG CGAAACGTGC CTTACCCTAT GATGCAACAG GTAATTATTT TAAATCGTAT
TTAATGAACT ACCCGCTTGG TGGGGCTTTT AATAGCCGTA TTAACCTTAA CCTACGTGAG
AATAAGGGCT ATACCTATGG GGCTCGTACA AACTTTTCGG GTACGGGGGA AGTAGGTGAG
TTTATCGCCT CAAGTGATGT TCGTACCGAT GTAACAGCCA AAGCCGTAAA TGAATTCATT
AATGAAATCA AAGCATATCA GCAACAAGGA ATGACAGATA CCGAGCTTAC CTTTATGCGA
AACTCGGTCT CCCAAGGGCA GGCACTGGAT TATGAGACGC CTTATCAGAA GGCGGGTTTT
ATGCGGATGA TCCAGCGCTA TCAATTGAGC CAAGATTTTA CTACCGAGCA GGACAAAATT
ATAAATACTG TAACAAAAGA TGAACTCAAT GCCCTCGCGG CTTCCGAGCT AGATATCTCG
AAAATGATTA TCTTAGTTGT TGGTGATAAG GCTAAAATTG AAGCGGATTT AGCAACTTTA
GGCTATCCAA TTGAAACTTT AGTATTGTAA
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| Protein sequence | MYKGNTLKRW ILAVAISAAL AGCATETSTK LPAGVTLIEN VQLTDSQVGI PYKKYQLANG
LTVILHQDRS DPLVHVDVTY HVGSARELAG RSGFAHLFEH MMFQGSEHVA DEQHFEVVTE
AGGTLNGSTN TDRTNYFETV PNNQLEKMLW LESDRMGFLL PALTSEKFEV QRETVKNERA
QRIDNQPYGR MSERFNQAMF PVGHPYSWPV IGWPEDLNRA TVDDVKHFFQ RWYGPNNATL
TIGGDFDELQ ALAWVNKYFG EIPRGPEVQP EPKTLVTIDK TRYLSMEDNV HLPLIRIGFP
TVYANHPDEA ALDLLANILG GGKTSLVYKN LVKDGYAVQA SVSQPCQELA CQMSIYALAN
PQKGVTLAEL EQRILASINE FEQRGVTDDD LQKVKVQFEA DTIFGLQSVK GKVSNLALNQ
TLFGKPNKIA SDLARYANVT KDDVMRVFKK YIKDKPMVVM SVVPQGMTAL VAHPDNFIAQ
MLPVAQTAVE GELPNAKLVS SFDRSKMPAT GAASVLKVPQ IWTSKLANGI EVMGTQSIET
PTVELVIYLN GGHRLVPVEK AGLASLTAEM LNESTQKRSS EQLSQALEVL GSTVDFSASE
YQSTIKVSAL TEHLDETLAI LEEKLFEPAF NEADFARVKQ QQLQQIQHMQ SNPSYQASAA
LYSLLYGNNN ALGVSDTGTL DSVAALTLAD VQAFYAEQYR GANAKIITVA NLPETALLPK
LAGLSQWQGE ASVLPPLKSF PALKGGIIYL IDKPGAAQSV INIAKRALPY DATGNYFKSY
LMNYPLGGAF NSRINLNLRE NKGYTYGART NFSGTGEVGE FIASSDVRTD VTAKAVNEFI
NEIKAYQQQG MTDTELTFMR NSVSQGQALD YETPYQKAGF MRMIQRYQLS QDFTTEQDKI
INTVTKDELN ALAASELDIS KMIILVVGDK AKIEADLATL GYPIETLVL
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