Gene SO_3555 details

Gene Information

• Locus tag: SO_3555
• Symbol: purK
• ID: 1171226
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3712931
• End bp: 3714028
• Gene Length: 1098 bp
• Protein Length: 365 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637345354
• Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
• Protein accession: NP_719102
• Protein GI: 24375059
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
• TIGRFAM ID: [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCAAA CAAGCACAAA ACCTAAGGTT TGGGTATTAG GAAATGGCCA ACTCGGTGCC 
ATGCTAACCC ATGCAGGTGA GCCGCTGGCG ATTGATGTTC GCGCCGTGGA TATAATGACG 
CCAACGGATG ATATTTTACC CCTCGCGCCA AACGATATTA TTACCGCCGA ACGTGAGCAG 
TGGCCTGAAT CCGCCTTAAG CTTACAACTC AGCACCCATC CGCATTTTGT TAACGGCCCA 
GTCTTTAGCC GTTTAGCCGA TCGCTATAGC CAAAAAAGCT TACTCGATCA GCTTAACGTC 
CCAACAGCAC CTTGGTCACT CGTTGATGAT CACACAAAGG TCGAAACTCT GTATCAAGCG 
TTTGGCCCAA GAGTTTTAAT GAAGCGCCGC ACTGGCGGTT ATGATGGCAA AGGTCAGCAT 
TGGCTAAAAC AAGCCGAAGC GGGTGATATC CCCCATGATT GGCGCAACTT AGCCATTGCC 
GAGCAAGCGA TAAACTTCGA TGAAGAAGTG TCCTTAGTCG GCGTGCGTAC CCGTGAAGGC 
CAATGCGTGT TTTATCCATT AACACTTAAC CTTCATCAAG ATGGCATTTT GATGGCATCG 
ATTGCACCAC TGGCACGCTT AGATCATCTG CAAGCCCAAG CCGAAACCAT GCTCAGTGCG 
ATTATGCATG AGCTGGAATA TGCCGGCGTG ATGGCGATGG AATGCTTCCG TGTTGGCGAC 
AATCTGCTGG TCAACGAGTT AGCCCCGCGG GTACACAACT CCGGCCATTG GACCCAAGCG 
GGCACCCATA TGGATCAATT TCAACTGCAT TTAAGAGCCT TGTGTGGGAT TGCGATTCCA 
CAGCCACAGG TGAACTTTCA ATGTGTGATG GTTAATCTGA TTGGTATCGA CAACGATCCC 
CGTTGGTTAA GCTTGCCCAA TGCAGAACTC TATTGGTACA ACAAAGAAGT ACGTCCTGGC 
CGCAAAGTCG GGCATTTAAA TCTTTCGGTG CCTAATCTGA CTGTATTAAC AAACAGCATT 
AGTGCACTAC AAACGTGGAT GCCAAACCAA TATCAAGCAC CTCTCGCTTG GATTTTGGCT 
GAGTTTACAA AAAGCTAA 

 

Protein sequence

MTQTSTKPKV WVLGNGQLGA MLTHAGEPLA IDVRAVDIMT PTDDILPLAP NDIITAEREQ 
WPESALSLQL STHPHFVNGP VFSRLADRYS QKSLLDQLNV PTAPWSLVDD HTKVETLYQA 
FGPRVLMKRR TGGYDGKGQH WLKQAEAGDI PHDWRNLAIA EQAINFDEEV SLVGVRTREG 
QCVFYPLTLN LHQDGILMAS IAPLARLDHL QAQAETMLSA IMHELEYAGV MAMECFRVGD 
NLLVNELAPR VHNSGHWTQA GTHMDQFQLH LRALCGIAIP QPQVNFQCVM VNLIGIDNDP 
RWLSLPNAEL YWYNKEVRPG RKVGHLNLSV PNLTVLTNSI SALQTWMPNQ YQAPLAWILA 
EFTKS