Gene SO_3554 details

Gene Information

• Locus tag: SO_3554
• Symbol: purE
• ID: 1171225
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3712440
• End bp: 3712931
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637345353
• Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
• Protein accession: NP_719101
• Protein GI: 24375058
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
• TIGRFAM ID: [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGCCC TTGTTGCTGT TGTTATGGGT TCTAAGAGTG ATTGGCCCAC AATGGAAGCC 
GCCGCTGAGA TCATGGATAA ACTGCAAGTG CCTTACCATG TTGAAGTTGT ATCAGCCCAT 
AGAACGCCAG ATAAACTGAT GGAGTTTGCA GCCGGTGCCG CTGACCGTGG TTTTAAAATT 
ATTATCGGTG GTGCGGGCGG TGCCGCGCAC TTACCCGGTA TGATCGCCTC TAAAACTCGC 
TTACCCGTAT TAGGTGTACC CGTGCAAAGT AAAGCACTCT CAGGCATGGA TAGCTTACTG 
TCTATCGTGC AAATGCCCAA AGGGATCGCT GTAGGCACCT TAGCAATTGG TACTGCTGGT 
GCCTTTAACG CCGGTTTACT CGCCTGCCAA ATTTTAGCCA ATAACGATGT AGCGCTTGCT 
GCTCGTTTAG ACGCCTTCAG AGAAGAACAA ACTCGTGCTG TGCTGGATAA TCCCGATCCG 
AGGGAAGTCT AA 

 

Protein sequence

MQALVAVVMG SKSDWPTMEA AAEIMDKLQV PYHVEVVSAH RTPDKLMEFA AGAADRGFKI 
IIGGAGGAAH LPGMIASKTR LPVLGVPVQS KALSGMDSLL SIVQMPKGIA VGTLAIGTAG 
AFNAGLLACQ ILANNDVALA ARLDAFREEQ TRAVLDNPDP REV