| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3553 |
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| Symbol | |
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| ID | 1171224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3710411 |
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| End bp | 3712177 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637345352 |
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| Product | putative sulfate transporter YchM |
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| Protein accession | NP_719100 |
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| Protein GI | 24375057 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCCAC ACGTGTCACA CTCTGCTCAT TTGTTTTCAT TAAGAATTGC GCACGCTCTT
AACGAAGCGT GCGTAAAAGA TAGGTATTCG TTTAAACGTT TTGGACAAGA TCTTCTCGCT
GGGTTGACGG TCGGGATAAT TGCTATTCCG CTGGCTATGG CTCTGGCGAT TGCTAGCGGC
GTGCCGCCAC AATACGGCCT TTACACTGCG ATTGTCGGTG GTTTTATCAT TGCGATGACG
GGCGGTTCCC GTTACAGCGT CTCAGGGCCA ACCGCCGCTT TTGTGGTATT GCTCTATCCT
ATAGCGCAGC AGTTTGGCTT AGCGGGGTTA CTCATTGCCA CCGTTATGTC AGGCATGATG
CTCGTTGCCA TGGCTATGCT AAGACTAGGC CGATTAATTC TCTACATTCC AGAATCAGTC
ACCTTAGGCT TTACCGCTGG TATTGGAGTG GTGATTGCCA CGTTACAGCT AAAAGACTTT
TTTGGTCTGC AGATTGAGCA TATGCCAGAG CAGTACTTTG CCAAACTCAT GGCGCTAGGG
CAGGCGCTAC CATCGCTTCA TCTACCAAGC CTGTTCATAG CAGCTGCTAC CTTAGCCACC
ATGTTACTGT GGCCTAGATT AAAAATTCCT GTACCGGCAC ACCTTCCCGC TATCGCCTTA
GGCAGTATCC TCGCCTTAAT ACTCAATGCC ATGGGCGCAG AGATTGAAAC CATTGGAACA
CGTTTCCACT ACCAATTAAC TGATGGCGGC ATAGGAAGTG GTATCCCCGC AGTCTTGCCT
CACTTTGAAT GGCCTTGGCT ACAGACAGGT CCAAATGGTC AAGCCTTTGA ATTTAATCTG
GCTGCCTTTC AAGCCTTACT CCCAGCAGCA TTTGCCATCG CCATGTTAGG CGCAATTGAA
TCACTACTCT GTGCCGTAGT CCTTGATGGC ATGACGGGCA AGCGCCACAG TGCAAACAGT
GAACTCCTTG GCCAAGGGAT AGGCAATATT ATCGCCCCCT TCTTTGGTGG GATCCCCGCA
ACCGCGGCAA TTGCCCGCAG TGCGGCAAAC GTAAAAGCTG GCGCTCAAAG TCCAATCGCG
TCTATGATCC ACGCCTTAGT GGTACTAATT GGCCTCGTGG CTCTCGCAGG GATTTTAGCC
TATTTACCCA TGTCGGCGAT GGCCGCATTA TTACTGGTAG TGGCTTGGAA TATGAGTGAA
GCACCAAAAG CAGTGCATTT ACTCAAAACA GCCCCCACCA GCGACATATT GGTGTTTTTA
AGCTGTTTTT CACTCACGGT GATTTTCGAT ATGGTGATCG CCATCAGTGT GGGGATTATT
TTAGCTGCGC TGCTGTTTAT GAAAGAAATC GCGGAGATGA CCAAGCTTTA TGATATAAGC
AGTAACAAAC GCTATGTTGA TCAATCTCTG CCCGCTGACT GGGCCGTGCT CAAAATTAAT
GGTCCATTAT TTTTTGCCGC GGCCGATCGC ATTTTTGCCG AGATAGCCAG CCTCACTCAA
GATAAACAAG TGATTGTACT TTACTTAGAT GGGGTATCAA TTCTGGATGC AGGCGGCCTT
GCTGCGCTCA GTAAACTAAT TGAAAAATGT AAACTTAATC AAACCAAGTT GCTCATTACC
GATCTGCAGT TCCAGCCCAT CCGTACCTTA GCAAAAGCTA AAATTCAGCC TGTTGAGGGG
GTATTAAAGT TTTATCCTAC TCTGCGTGAG GCCCTGACCG AGGCACCATC ACCCGAGTTA
GAGGCAACTC CAGAAGCCAC CGATTAA
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| Protein sequence | MDPHVSHSAH LFSLRIAHAL NEACVKDRYS FKRFGQDLLA GLTVGIIAIP LAMALAIASG
VPPQYGLYTA IVGGFIIAMT GGSRYSVSGP TAAFVVLLYP IAQQFGLAGL LIATVMSGMM
LVAMAMLRLG RLILYIPESV TLGFTAGIGV VIATLQLKDF FGLQIEHMPE QYFAKLMALG
QALPSLHLPS LFIAAATLAT MLLWPRLKIP VPAHLPAIAL GSILALILNA MGAEIETIGT
RFHYQLTDGG IGSGIPAVLP HFEWPWLQTG PNGQAFEFNL AAFQALLPAA FAIAMLGAIE
SLLCAVVLDG MTGKRHSANS ELLGQGIGNI IAPFFGGIPA TAAIARSAAN VKAGAQSPIA
SMIHALVVLI GLVALAGILA YLPMSAMAAL LLVVAWNMSE APKAVHLLKT APTSDILVFL
SCFSLTVIFD MVIAISVGII LAALLFMKEI AEMTKLYDIS SNKRYVDQSL PADWAVLKIN
GPLFFAAADR IFAEIASLTQ DKQVIVLYLD GVSILDAGGL AALSKLIEKC KLNQTKLLIT
DLQFQPIRTL AKAKIQPVEG VLKFYPTLRE ALTEAPSPEL EATPEATD
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