| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3552 |
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| Symbol | |
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| ID | 1171223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3708345 |
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| End bp | 3710210 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637345351 |
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| Product | von Willebrand factor type A domain-containing protein |
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| Protein accession | NP_719099 |
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| Protein GI | 24375056 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACATC CATTACGTTT ATTGAACACC CAACTCGTTT CCATCTCCTC ACATAAAAAA
CGTCACAATG CAGCTGTTTC TGCCTTAACA CTCGCCATTC TATTGGGGTT GAGTGGTTGT
ATTGATAAAC AAACTGAATC GGAGAGTCGC ACTGAATTAG CGACTCAAGC TAACGAGGCT
GCAGAGCAGC AAGCTGCGCT TGTGCAACGT GTTGAGGCTG AACGGCAGGC TAAAATACAA
CATGAAAATG AATTAAGTGC AAAATCGCAG GATATGCGTG CTGAACATAT GCCTTATATT
GCTCAATATG CCGCTAGTTC TAGTGTAGCC GCCCCCGGGT TAAACGATGA TTGGCAAGGG
GCAGTGCTTC CTGAGCGTAA TCAATTTGAA AAGCAAGTAC AAAACGGCAT TATGGTCGCG
GGAGAAATCC CTGTATCGAC CTTTTCAATC GATGTTGATA CCGGCAGTTA TACCACATTA
AGGCGAATGC TAAAGGAAGG GCGGTTACCG CAGAAAGACA CGTTACGCGT TGAAGAAATG
CTGAATTATT TTTCTTATAA CTACCCACAA CCCAATAAAA ATGAGGCGCC ATTTAGTGTA
ACAACAGAGC TTGCACCATC ACCTTATAAT GATGACATGA TGTTATTGCG TATTGGCTTA
AAGGGATATG AGCAGAGTAA AGCTGAGCTT GGGGCGAGTA ATTTAGTCTT CTTGCTGGAT
GTCTCTGGCT CTATGGCGTC TGATGATAAG TTACCTCTGC TGCAAACCGC CTTAAAAATG
CTGACTCAAC AACTGGATGA ACAGGATAAA GTATCGATTG TGGTCTACGC GGGGGCTGCA
GGCGTGGTGC TCGATGGCGC TGCAGGTAAC GATATTAAAA TCCTTACCTA TGCATTGGAA
CAGTTAACTG CAGGAGGTTC AACCAATGGC GCAGAAGGGA TCCAACTGGC TTATCAGTTA
GCGCAGAAAC ATTTTGTTAA AGGTGGCATT AACCGAGTCA TTCTCGCAAC CGACGGTGAT
TTTAATGTTG GGACCACCAA CCTCGATGAG TTAGTCGACT TGGTTGAAGT ACAGAAAAAA
CATGGAATTG GCTTGACGAC ACTTGGCTTT GGCATGGGTA ACTACAATGA CCACTTAATG
GAGCAACTTG CCAATAAAGG TAATGGACAA TATGCCTACA TTGATTCTGT GAACGAGGCT
CGAAAAGTGC TGGTAGAACA GTTAGGTGCG ACTTTGCTGA CCATCGTCAA AGAGGTAAAA
GTGCAAGTTG AGTTTAATCC CGCTTTAGTT TCAGAGTACC GTCTTATTGG TTATGAAAAC
CGCGCCTTAG CCCGCGAGGA TTTTAATAAC GATAAGGTGG ACGCTGGGGA AATTGGTGCG
GGTCATACCG TTACCGCGCT TTATGAACTT CGCTATGTTG AAACCGGTCA TATGGCGAAT
GACAAACTCC GTTACGGTTA TAACCCTGAT ACAGGCAGTG AAAAATATAG CCGTGACGAA
ATTGCCTATC TTAAATTACG TTATCAACTG CCCGATGCGA GTAAAAGCCA ATTATTGACG
TATCCGATAA GAGCCGATCA GAGCGTTAAA ACGGTAAATC AAGCCAGTGA TGATTTTAGA
TTTGCGGCGG CAGTTGCGGG ATTAGGGCAG TTACTGAATC AAAGCCACTA CTTGCATCAA
TTTGATTATA ATAAACTTAG GGGGCTTACT CGTTCTGCAC TGGGGGAAGA TACAATGGGT
TATCGACATG AGTTTATGCA ACTTGTTGAT ACTGCAGCGC TGCTAGCGCA AACGAATCAA
GTCCCCATTA AGAAATCCTT TGATGCAGAG AATAAACCTT TTCCACCTCA GGATAAACTT
CATTAG
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| Protein sequence | MTHPLRLLNT QLVSISSHKK RHNAAVSALT LAILLGLSGC IDKQTESESR TELATQANEA
AEQQAALVQR VEAERQAKIQ HENELSAKSQ DMRAEHMPYI AQYAASSSVA APGLNDDWQG
AVLPERNQFE KQVQNGIMVA GEIPVSTFSI DVDTGSYTTL RRMLKEGRLP QKDTLRVEEM
LNYFSYNYPQ PNKNEAPFSV TTELAPSPYN DDMMLLRIGL KGYEQSKAEL GASNLVFLLD
VSGSMASDDK LPLLQTALKM LTQQLDEQDK VSIVVYAGAA GVVLDGAAGN DIKILTYALE
QLTAGGSTNG AEGIQLAYQL AQKHFVKGGI NRVILATDGD FNVGTTNLDE LVDLVEVQKK
HGIGLTTLGF GMGNYNDHLM EQLANKGNGQ YAYIDSVNEA RKVLVEQLGA TLLTIVKEVK
VQVEFNPALV SEYRLIGYEN RALAREDFNN DKVDAGEIGA GHTVTALYEL RYVETGHMAN
DKLRYGYNPD TGSEKYSRDE IAYLKLRYQL PDASKSQLLT YPIRADQSVK TVNQASDDFR
FAAAVAGLGQ LLNQSHYLHQ FDYNKLRGLT RSALGEDTMG YRHEFMQLVD TAALLAQTNQ
VPIKKSFDAE NKPFPPQDKL H
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