Gene SO_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3546 
Symboltal 
ID1171217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3703102 
End bp3704058 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content43% 
IMG OID637345345 
Producttransaldolase B 
Protein accessionNP_719093 
Protein GI24375050 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATA CATTAGAGCA ACTCAAGTCA TACACTACTA TTGTGGCCGA TACTGGCGAT 
ATTGAAGCAA TCAAGCGCTA TCAACCAGAA GACGCAACCA CTAACCCATC ACTCATTTTA
AAAGCTGCAC AAATCCCTGA GTATAGCGCG CTAATCGACA ATGCCATCGC ATGGGCTAAA
TTACAAAGTA CTGATATTGA GCAACAGATT GATGATGCCA GCGATAAACT AGCTGTCAAC
ATTGGAGTCG AAATTCTAAA ACTCGTTCCA GGTCGAATCT CAACTGAAGT TGATGCACGC
TTATCCTTCG ATAAAGAAAA ATCTATCGCT AAAGCGCACA AGCTAGTCCG TCTGTATCAA
GAAGCTGGTG TAGATAAATC TCGTATTCTG ATCAAACTTG CATCAACTTG GGAAGGCATT
TGTGCCGCCA AAGAATTGGA GCAAGAAGGT ATCAACTGTA ACTTAACGCT GCTATTCAGC
TTTTCGCAGG CACGGGCTTG TGCTGAAGCA GGCGTGTACT TAATCTCTCC ATTTGTAGGT
CGCATTCTCG ATTGGTATAA AAAAGATACA GGTAAAGATT ATGACGCAGT GAACGATCCT
GGTGTCGTTT CAGTCACTGA AATTTACAAC TACTACAAAC AGCATGGCTA TAACACTGTG
GTAATGGGTG CAAGTTTCCG TAATATTGGT GAAATCATTG AGTTAGCAGG CTGTGACCGC
CTAACAATTG GTCCTTCATT ACTTGAAGAA TTAGCTAATT CTCAGCTGGC TATTCAGCCA
AAACTTGTCC CAACTAGCAC AACAGTTGCC GTAGCGGAAC CATTAACAGA AGCGCAATTC
CGTTGGGAAT TCAACCAAGA TGCGATGGCT GTCGATAAGT TAGCTGAAGG TATCCGTAAC
TTTGCTATCG ACCAAGGCAA ACTCGAAGTC ATGCTCAAGG CAAAACTGGC AAACTAA
 
Protein sequence
MANTLEQLKS YTTIVADTGD IEAIKRYQPE DATTNPSLIL KAAQIPEYSA LIDNAIAWAK 
LQSTDIEQQI DDASDKLAVN IGVEILKLVP GRISTEVDAR LSFDKEKSIA KAHKLVRLYQ
EAGVDKSRIL IKLASTWEGI CAAKELEQEG INCNLTLLFS FSQARACAEA GVYLISPFVG
RILDWYKKDT GKDYDAVNDP GVVSVTEIYN YYKQHGYNTV VMGASFRNIG EIIELAGCDR
LTIGPSLLEE LANSQLAIQP KLVPTSTTVA VAEPLTEAQF RWEFNQDAMA VDKLAEGIRN
FAIDQGKLEV MLKAKLAN