Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3546 |
Symbol | tal |
ID | 1171217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3703102 |
End bp | 3704058 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637345345 |
Product | transaldolase B |
Protein accession | NP_719093 |
Protein GI | 24375050 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAATA CATTAGAGCA ACTCAAGTCA TACACTACTA TTGTGGCCGA TACTGGCGAT ATTGAAGCAA TCAAGCGCTA TCAACCAGAA GACGCAACCA CTAACCCATC ACTCATTTTA AAAGCTGCAC AAATCCCTGA GTATAGCGCG CTAATCGACA ATGCCATCGC ATGGGCTAAA TTACAAAGTA CTGATATTGA GCAACAGATT GATGATGCCA GCGATAAACT AGCTGTCAAC ATTGGAGTCG AAATTCTAAA ACTCGTTCCA GGTCGAATCT CAACTGAAGT TGATGCACGC TTATCCTTCG ATAAAGAAAA ATCTATCGCT AAAGCGCACA AGCTAGTCCG TCTGTATCAA GAAGCTGGTG TAGATAAATC TCGTATTCTG ATCAAACTTG CATCAACTTG GGAAGGCATT TGTGCCGCCA AAGAATTGGA GCAAGAAGGT ATCAACTGTA ACTTAACGCT GCTATTCAGC TTTTCGCAGG CACGGGCTTG TGCTGAAGCA GGCGTGTACT TAATCTCTCC ATTTGTAGGT CGCATTCTCG ATTGGTATAA AAAAGATACA GGTAAAGATT ATGACGCAGT GAACGATCCT GGTGTCGTTT CAGTCACTGA AATTTACAAC TACTACAAAC AGCATGGCTA TAACACTGTG GTAATGGGTG CAAGTTTCCG TAATATTGGT GAAATCATTG AGTTAGCAGG CTGTGACCGC CTAACAATTG GTCCTTCATT ACTTGAAGAA TTAGCTAATT CTCAGCTGGC TATTCAGCCA AAACTTGTCC CAACTAGCAC AACAGTTGCC GTAGCGGAAC CATTAACAGA AGCGCAATTC CGTTGGGAAT TCAACCAAGA TGCGATGGCT GTCGATAAGT TAGCTGAAGG TATCCGTAAC TTTGCTATCG ACCAAGGCAA ACTCGAAGTC ATGCTCAAGG CAAAACTGGC AAACTAA
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Protein sequence | MANTLEQLKS YTTIVADTGD IEAIKRYQPE DATTNPSLIL KAAQIPEYSA LIDNAIAWAK LQSTDIEQQI DDASDKLAVN IGVEILKLVP GRISTEVDAR LSFDKEKSIA KAHKLVRLYQ EAGVDKSRIL IKLASTWEGI CAAKELEQEG INCNLTLLFS FSQARACAEA GVYLISPFVG RILDWYKKDT GKDYDAVNDP GVVSVTEIYN YYKQHGYNTV VMGASFRNIG EIIELAGCDR LTIGPSLLEE LANSQLAIQP KLVPTSTTVA VAEPLTEAQF RWEFNQDAMA VDKLAEGIRN FAIDQGKLEV MLKAKLAN
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