Gene SO_3543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3543 
Symbol 
ID1171214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3698981 
End bp3700021 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content47% 
IMG OID637345342 
ProductISSod13, transposase 
Protein accessionNP_719090 
Protein GI24375047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCATA GTAACAATCC AATCATCAAA CACAAAACAG GTTTACTCAA TCTGGCAGAG 
GAACTGAGCA ACGTCTCCAG AGCCTGCAAA GTCATGGGTG TGTCTCGTGA TACGTTTTAT
CGTTACCGCG AGTTAGTGGA CGATGGCGGT GTTGATGCAC TGATCGAAAA AAGTCGTAGA
AGTCCAAATC TCAAGAACCG TGTCGAAGAA GCTGTTGAAC AGGCAGTGAT GGAGTATGCG
ATTGAATTTC CCGCCCATGG CCAACACAGA ACCAGCAATG AACTGCGCAA AAAAGGCGTG
TTTGTTTCTG GCAGTGGTGT CCGCTCAATC TGGTTGCGAC ATGATTTAGA GAACTTTAAG
AAGCGACTGA AAGCCTTGGA AGCCAAAGTA GCTCGCGATG GCATTCAACT TACTGATGAA
CAGATTGCGG CACTTGAGCG CAAAAAACAC GACGATGAAG CCTGTGGTGA GATTGAAACC
GCGCACCCAG GCTACCTTGG GTCGCAAGAC ACGTTTTATG TCGGAAACCT CAAGGGCGTT
GGTCGTATCT ATCAGCAAAC CTATGTCGAT ACGTACTGCA AAGTCGCTCA TTGCAAGCTC
TATACTACGA AAACACCTAT CACTGCAGCG GACTTATTGA ACGACAAAGT ATTGCCGTTT
TACGAGTCAC AGCAGTTGCC GGTGCTGCGT ATTTTAACTG ACCGTGGCAC AGAGTATTGC
GGCAAGGTCG AGCACCATGA TTACCAGCTA TATCTGGCGA TTAATGATAT CGACCACACG
AAAACCAAAG CGATGTCGCC GCAAACGAAT GGGATCTGCG AGCGGTTTCA TAAGACGATC
CTGAACGAGT TTTATCAGGT GACCTTCCGC AAAAAGCTGT ACCAAACGCT GGAGGAGCTG
CAAAAAGATC TGGACGAGTG GCTGTCTTAC TACAACAATG AACGCACTCA TCAAGGCAAA
ATGTGCAACG GCAGAACGCC AGTTGAAACA TTGATTGATG GGAAACGGGT TTGGGCGGAA
AAGAATCTGA CTCGAATCTA A
 
Protein sequence
MLHSNNPIIK HKTGLLNLAE ELSNVSRACK VMGVSRDTFY RYRELVDDGG VDALIEKSRR 
SPNLKNRVEE AVEQAVMEYA IEFPAHGQHR TSNELRKKGV FVSGSGVRSI WLRHDLENFK
KRLKALEAKV ARDGIQLTDE QIAALERKKH DDEACGEIET AHPGYLGSQD TFYVGNLKGV
GRIYQQTYVD TYCKVAHCKL YTTKTPITAA DLLNDKVLPF YESQQLPVLR ILTDRGTEYC
GKVEHHDYQL YLAINDIDHT KTKAMSPQTN GICERFHKTI LNEFYQVTFR KKLYQTLEEL
QKDLDEWLSY YNNERTHQGK MCNGRTPVET LIDGKRVWAE KNLTRI