Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3543 |
Symbol | |
ID | 1171214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3698981 |
End bp | 3700021 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637345342 |
Product | ISSod13, transposase |
Protein accession | NP_719090 |
Protein GI | 24375047 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCCATA GTAACAATCC AATCATCAAA CACAAAACAG GTTTACTCAA TCTGGCAGAG GAACTGAGCA ACGTCTCCAG AGCCTGCAAA GTCATGGGTG TGTCTCGTGA TACGTTTTAT CGTTACCGCG AGTTAGTGGA CGATGGCGGT GTTGATGCAC TGATCGAAAA AAGTCGTAGA AGTCCAAATC TCAAGAACCG TGTCGAAGAA GCTGTTGAAC AGGCAGTGAT GGAGTATGCG ATTGAATTTC CCGCCCATGG CCAACACAGA ACCAGCAATG AACTGCGCAA AAAAGGCGTG TTTGTTTCTG GCAGTGGTGT CCGCTCAATC TGGTTGCGAC ATGATTTAGA GAACTTTAAG AAGCGACTGA AAGCCTTGGA AGCCAAAGTA GCTCGCGATG GCATTCAACT TACTGATGAA CAGATTGCGG CACTTGAGCG CAAAAAACAC GACGATGAAG CCTGTGGTGA GATTGAAACC GCGCACCCAG GCTACCTTGG GTCGCAAGAC ACGTTTTATG TCGGAAACCT CAAGGGCGTT GGTCGTATCT ATCAGCAAAC CTATGTCGAT ACGTACTGCA AAGTCGCTCA TTGCAAGCTC TATACTACGA AAACACCTAT CACTGCAGCG GACTTATTGA ACGACAAAGT ATTGCCGTTT TACGAGTCAC AGCAGTTGCC GGTGCTGCGT ATTTTAACTG ACCGTGGCAC AGAGTATTGC GGCAAGGTCG AGCACCATGA TTACCAGCTA TATCTGGCGA TTAATGATAT CGACCACACG AAAACCAAAG CGATGTCGCC GCAAACGAAT GGGATCTGCG AGCGGTTTCA TAAGACGATC CTGAACGAGT TTTATCAGGT GACCTTCCGC AAAAAGCTGT ACCAAACGCT GGAGGAGCTG CAAAAAGATC TGGACGAGTG GCTGTCTTAC TACAACAATG AACGCACTCA TCAAGGCAAA ATGTGCAACG GCAGAACGCC AGTTGAAACA TTGATTGATG GGAAACGGGT TTGGGCGGAA AAGAATCTGA CTCGAATCTA A
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Protein sequence | MLHSNNPIIK HKTGLLNLAE ELSNVSRACK VMGVSRDTFY RYRELVDDGG VDALIEKSRR SPNLKNRVEE AVEQAVMEYA IEFPAHGQHR TSNELRKKGV FVSGSGVRSI WLRHDLENFK KRLKALEAKV ARDGIQLTDE QIAALERKKH DDEACGEIET AHPGYLGSQD TFYVGNLKGV GRIYQQTYVD TYCKVAHCKL YTTKTPITAA DLLNDKVLPF YESQQLPVLR ILTDRGTEYC GKVEHHDYQL YLAINDIDHT KTKAMSPQTN GICERFHKTI LNEFYQVTFR KKLYQTLEEL QKDLDEWLSY YNNERTHQGK MCNGRTPVET LIDGKRVWAE KNLTRI
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