| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3542 |
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| Symbol | |
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| ID | 1171213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3696497 |
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| End bp | 3698863 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637345341 |
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| Product | putative phosphoketolase |
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| Protein accession | NP_719089 |
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| Protein GI | 24375046 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3957] Phosphoketolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAATA CACATGAAAT AAATGCTCTT AAAAAATACG TAAGAGCTAC TAACTTCCTC
GCCACCTCCC AGATTTACTT AAAGCAAAAC GTACTACACA AGCGCCCGCT TGCGCATTCG
GACATAAAGC CTCGCTTGCT CGGTCACTGG GGAACTTGCC CTGGTATCAA CTTTGTCTAC
GCCAACATTA ACCGACTTAT AGTAAAACAT AATCGTCCTT TTATTTATTT AGTCGGTCCA
GGTCATGGCT TCCCTGCAGT ACAAGCAAAC TTATTCATTG AAGGCTCACT AAGCCACTTC
TACCCAGAAA CCATTCCTTA TAATGAAACT GGTATTGAGG ATATCTGTAA GAAATTCTCA
GCAGCTTACG GTTATCCTTC GCATGCTAAC CCTGAGGCTC CAGGACAAAT TCTTGAAGGT
GGTGAATTAG GTTATTCATT ATCCGTTGGC TGGGGGGCAG TGCTTGATAA CCCTGATCTT
ATCGCGACCG TATTAGTCGG TGACGGTGAA TCTGAAACAG GTCCATTAGC CGCCTCTTGG
TACGCAAACC GTTTAGTTTC ACCCGCAACG AACGGTGCTG TATTACCTAT CGTCCATATT
AACGGCTATA AAATCTCAGG GCCAACGCGT ATGGGACGTA TGAGCCATGA AGAATTAGAT
CTTGAATTCC GTGGCCTTGG CTATCACCCA ATTATTGTGG ACAGCGAAGC CGAAGAAGAT
GTTTATATCC AAATGGCAAC CGCCATGGAT ACTGCTTATA GCATGATCAA CGATATTCAA
ACCCGTGCCC GCAAAGGTGA AGATATTGTT AAACCTCGCT GGCCAGTGAT TTTAATGCGT
ACAGCTAAAG GCTGGACGGG TGTAAGCGAA TATAACGGGC AAAAACTCGA AGGAAACTGC
GAATCACACC AAGTTATCGT GAACAAATGT GCGACTGACA AAGGTCATCT CGCTGCCCTT
GATAACTGGT TAGCCAGTTA TCGGTTCCAA GAGCTGTACC AAATCAATGC CCAAGGTGAA
TTGATTTTTG ATGCTGATAT TTGCTCATTG ATCCCACCAA AACACTTAGC TTGTGGTCGC
CAACATCTTA CCTATGGTGG CGAAGTTGTA AGAGCGTTAT CTAATCCTGA TTTAGAAAAA
CTCAGCTACG GCCCAGAAGT GCCACGTGGA CAACGCGGTT ACTCTATGCT GAAGATGGGA
CAATGGATGC GTGATGCGTT CAAACTCAAC CGTGACCAGC GTAATTTACG TATCTTTAGT
CCAGACGAAA CCTATTCAAA TCAACTTCAG GCCGTATTTG AAGAAACGGA CCGAGCATGG
CAATGGCCAA TCGAGAGCTG GGACGAAGAT ATGTCTCGTG ATGGCCGTGT AATAGAGCTG
CTATCTGAAA ACTTGCTTTT CGGTATGTTG CACGGCTACA CAGTCACAGG CCGCCACGGC
ATGTTCCCAA CCTACGAGTC ATTCTCACAG GTGGTTTCAT CAATGGCAGA TCAATACTGT
AAATATGTTT ATGCAAGCCA AGGCGTGCAT TTCCGTAAAC CTTTGCCTGC GTGTAACGTG
GTTCTATCTT CATTATTAGA GCGTCAAGAT CACAATGGCT ACTCACACCA AAATCCGTCT
TTCTTAGGCG CGATGTTAGA GAAGCACCCA AAAATTATCT CTGCCTATTT ACCTGCTGAT
GCTAACAGTA CTTTAGTTTA CACTGAACGT GCATTTGCGG ATCGTGACAA GCTGAACATC
CTCGTAGCAG GTAAAAAAGA ACTACCACAA TGGTTAAGCT TAGAAGAAGC ACGTAAACAA
GCAAAAGACG GTGTCATGGT GTGGGATTTT GCTTCAGATG AAAATCCAGA TATCGTCCTT
GCAGGTTGCG GTGACTATGT AACACAAGAA TGTATGGCAT CATTAGTGAT CATTCGTGAA
CTGCTTCCTC GAGTAAGAAT TCGTTTTGTT AGCGTTACAG AATTAAGTAG CGATGGCTTA
GGCAGCCGTA AATTTAAAGA AAAACCATGG ATGATGGATG AAATATTTAC CCAAGATAAA
GGAGTTGTAT TTAACTATCA CGGTTATCCA AATACAATCA AAAAGTTAAT TTTTGATTAC
AAAGGAAGCC GTCGTTTCAG AATTAAAGGT TACGAGGAAG AAGGTTCAAC GACTACTCCA
TTTGATATGG GTGTTCGCAA CGGAACTTCT CGCTATCACC TTGTGATTGA TATGGCTTAC
AAACTGTTCC AACAGGGCGT TATTGATGAA ACTAAACATG TTTCAATTAC AACCGATATG
CTGCAAAGAC TCGTTGATCA CCGCAACTAT ATAAAAGCAC ATGGAGTAGA CCCTGTTGAA
ATTGAAAATT GGGTTTGGAC ACGCTAA
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| Protein sequence | MTNTHEINAL KKYVRATNFL ATSQIYLKQN VLHKRPLAHS DIKPRLLGHW GTCPGINFVY
ANINRLIVKH NRPFIYLVGP GHGFPAVQAN LFIEGSLSHF YPETIPYNET GIEDICKKFS
AAYGYPSHAN PEAPGQILEG GELGYSLSVG WGAVLDNPDL IATVLVGDGE SETGPLAASW
YANRLVSPAT NGAVLPIVHI NGYKISGPTR MGRMSHEELD LEFRGLGYHP IIVDSEAEED
VYIQMATAMD TAYSMINDIQ TRARKGEDIV KPRWPVILMR TAKGWTGVSE YNGQKLEGNC
ESHQVIVNKC ATDKGHLAAL DNWLASYRFQ ELYQINAQGE LIFDADICSL IPPKHLACGR
QHLTYGGEVV RALSNPDLEK LSYGPEVPRG QRGYSMLKMG QWMRDAFKLN RDQRNLRIFS
PDETYSNQLQ AVFEETDRAW QWPIESWDED MSRDGRVIEL LSENLLFGML HGYTVTGRHG
MFPTYESFSQ VVSSMADQYC KYVYASQGVH FRKPLPACNV VLSSLLERQD HNGYSHQNPS
FLGAMLEKHP KIISAYLPAD ANSTLVYTER AFADRDKLNI LVAGKKELPQ WLSLEEARKQ
AKDGVMVWDF ASDENPDIVL AGCGDYVTQE CMASLVIIRE LLPRVRIRFV SVTELSSDGL
GSRKFKEKPW MMDEIFTQDK GVVFNYHGYP NTIKKLIFDY KGSRRFRIKG YEEEGSTTTP
FDMGVRNGTS RYHLVIDMAY KLFQQGVIDE TKHVSITTDM LQRLVDHRNY IKAHGVDPVE
IENWVWTR
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