| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3541 |
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| Symbol | |
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| ID | 1171212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3694596 |
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| End bp | 3696062 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637345340 |
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| Product | sodium:alanine symporter family protein |
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| Protein accession | NP_719088 |
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| Protein GI | 24375045 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGAAA CTATTGTAAA TTTTTTGAAC GCACTCCTTT GGGGCAAGCT GCTCGTATAT
GGATTAGTTG GAGCTGGTCT ATATTTCACC TTACGGCTTG TTTTTATTCA ACTTACACAT
TTTAAACACT CTCTTAAAAT CATGACGATG AGCCGTCAAG GTTGCGAGAG TGGTCTGTCT
TCATTCCAAG TGTTTTGTAC CAGTATGGCT GCTCGTGTTG GGGCTGGGAA TATGGCTGGG
GTTGCTGTCG CAATTGGCGC AGCAGGTCCT GGCGCAGTAT TCTGGATGTG GTTAATTGCC
ATGTTAGGGA TGGCGACTGC CATGGTGGAG TCAACACTTG CGCAAGTCTA TAAAGTACGT
GATGCCAATG GCCAATTTCG CGGAGGTCCT TCTTATTATA TGGAGAAAGG GCTTGGTCAG
AGATGGATGG GAGTGCTGTT TGCTTTCTTT CTGATTATCG CGTTCGGTTT AGTGTTTAAT
GCTGTTCAGG CGAATACGAT TACGGGGGCA ATGGAGCGGG TATTTGGGTT TGATCCGACC
TATGTCGGCA TTGGGTTGGT GCTAGCCAGT GGCTTTGTGA TTATGGGGGG GCTGCGTAAA
GTCGCACGAG TGTCAGAGTT TATTGTTCCT ATTATGGCTC TAGCCTACAT TCTGATTGCA
TTTATTATTG TGCTATTCAA TTTAGAGCAA TTGCCAGCCG TGATTAGTCT GATCGTGAAA
AGTGCCTTTG GTTGGCAAGA AGCTGCTGCG GGTGGTGTTG CCTACACTGT CGCTCAGGCT
ATGCAAGCGG GTATTGCGCG TGGGCTTTTC TCAAACGAGG CGGGGATGGG AAGTGCGGCA
AACGTTGCTG CAAGTGCATC ACCTAACCCT AATCATCCGG CATCCCAAGG TTTTGTGCAA
ATGATGGGGG TATTTGTTGA TACCATCGTG ATTTGTACCG CAACGGCTGC CATTATTCTG
CTTTCTGGGG ATATTGGTTC TAGTGATGAT GGTATTCGTC TCACAATCAA TGCGATGTCA
AACCATGTGG GCGATTGGGG CGGAGCCTTT ATTGCCGTAG CCATTTTCCT ATTCTGTTTT
ACTTCTATTA TTGCTAACTA TTCCTATGCA GAAACCAACG TGATGTTTTT AACGGGTAAC
AGTACTAAGG CATTACCGTT ATTTCGCCTG TGTGTGCTGG GGATGGTGAT GTTTGGCTCT
GTGGCTAAAA TTAGCTTAGT TTGGAACTTA GCGGATGTGT CAATGGGGTT AATGGCAACG
GTCAATATAG TCGCTTTGTT ATTGTTGTCT GGTTTGGCTA TTCGAGTGAT CAATGATTAC
TGCGATCAAC TTAAGAGCGG TAAAATGCCT GAGTTTGATC GAAGTAAGTT TCCTGAGTTA
ATGGAACAAC TTGACGATGG AATTTGGCAG GATAACAGCG TAAACGAACT GGCTAAAGCG
CCTTCTGAAT CTGCTATCAG TCGATAA
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| Protein sequence | MLETIVNFLN ALLWGKLLVY GLVGAGLYFT LRLVFIQLTH FKHSLKIMTM SRQGCESGLS
SFQVFCTSMA ARVGAGNMAG VAVAIGAAGP GAVFWMWLIA MLGMATAMVE STLAQVYKVR
DANGQFRGGP SYYMEKGLGQ RWMGVLFAFF LIIAFGLVFN AVQANTITGA MERVFGFDPT
YVGIGLVLAS GFVIMGGLRK VARVSEFIVP IMALAYILIA FIIVLFNLEQ LPAVISLIVK
SAFGWQEAAA GGVAYTVAQA MQAGIARGLF SNEAGMGSAA NVAASASPNP NHPASQGFVQ
MMGVFVDTIV ICTATAAIIL LSGDIGSSDD GIRLTINAMS NHVGDWGGAF IAVAIFLFCF
TSIIANYSYA ETNVMFLTGN STKALPLFRL CVLGMVMFGS VAKISLVWNL ADVSMGLMAT
VNIVALLLLS GLAIRVINDY CDQLKSGKMP EFDRSKFPEL MEQLDDGIWQ DNSVNELAKA
PSESAISR
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