Gene SO_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3540 
Symbol 
ID1171211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3693716 
End bp3694489 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content41% 
IMG OID637345339 
Producthypothetical protein 
Protein accessionNP_719087 
Protein GI24375044 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATTT TGGTTTCACC TGCGAAAACC CTAGATTTTG AGCAACCACC TTTGACTCAA 
ATCCATACTC GGCCTGATTT TTTAGCCCAA AGCCAAGAGC TAATCCAAGT CTGTCAACAG
TTAACGCCCA GCGATATAGC AACATTGATG AAGGTCAGTG ATAGCATTGC TGGATTAAAT
GCAGCGCGAT TTGGCGAGTG GAAACCCGAT TACAGCATTG ATAATGCCAA ACAGGCTATC
TTTGCTTTTC GAGGTGATGT TTATACAGGT TTTGATGCAG ATACACTAAC AGCGGCACAG
CTTGAACGTA CCCAGTCACA ATTGCGAATT TTATCGGGAC TATATGGTTT ACTGCGTCCA
CTCGATTTGA TTTTGCCCTA TCGTTTAGAA ATGGGAACGG CACTCACTAA TCAAAAGGGC
AAGAATCTCT ACGAGTTTTG GGGAAATACT CTTACTGATG CAGTCAATAG TGCGGTAGCA
GCGCAGGGGG ATGGTATCAT TATAAACCTT GCCTCAAATG AATATTTTAA AGCGATTAAG
CCAAAATTTT TAAATGGACA ATTAATCACT CCCGTATTTA AGGACTTTAA AAATGGGCAG
TATAAAGTCA TTAGTTTTTT TGCTAAGCGG GCACGAGGAA TGATGGCAAG ATATATTATT
GATCAGCAAG TGAGTTCTAT TGACGGGTTA AAAGCTTTTG AGGTTGATGG TTATTACTAC
AGCGAAGAGC TCAGTAAGCC AAATGAACCA ACCTTCCTGC GGGAAGCACA GTAG
 
Protein sequence
MLILVSPAKT LDFEQPPLTQ IHTRPDFLAQ SQELIQVCQQ LTPSDIATLM KVSDSIAGLN 
AARFGEWKPD YSIDNAKQAI FAFRGDVYTG FDADTLTAAQ LERTQSQLRI LSGLYGLLRP
LDLILPYRLE MGTALTNQKG KNLYEFWGNT LTDAVNSAVA AQGDGIIINL ASNEYFKAIK
PKFLNGQLIT PVFKDFKNGQ YKVISFFAKR ARGMMARYII DQQVSSIDGL KAFEVDGYYY
SEELSKPNEP TFLREAQ