Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3540 |
Symbol | |
ID | 1171211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3693716 |
End bp | 3694489 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637345339 |
Product | hypothetical protein |
Protein accession | NP_719087 |
Protein GI | 24375044 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGATTT TGGTTTCACC TGCGAAAACC CTAGATTTTG AGCAACCACC TTTGACTCAA ATCCATACTC GGCCTGATTT TTTAGCCCAA AGCCAAGAGC TAATCCAAGT CTGTCAACAG TTAACGCCCA GCGATATAGC AACATTGATG AAGGTCAGTG ATAGCATTGC TGGATTAAAT GCAGCGCGAT TTGGCGAGTG GAAACCCGAT TACAGCATTG ATAATGCCAA ACAGGCTATC TTTGCTTTTC GAGGTGATGT TTATACAGGT TTTGATGCAG ATACACTAAC AGCGGCACAG CTTGAACGTA CCCAGTCACA ATTGCGAATT TTATCGGGAC TATATGGTTT ACTGCGTCCA CTCGATTTGA TTTTGCCCTA TCGTTTAGAA ATGGGAACGG CACTCACTAA TCAAAAGGGC AAGAATCTCT ACGAGTTTTG GGGAAATACT CTTACTGATG CAGTCAATAG TGCGGTAGCA GCGCAGGGGG ATGGTATCAT TATAAACCTT GCCTCAAATG AATATTTTAA AGCGATTAAG CCAAAATTTT TAAATGGACA ATTAATCACT CCCGTATTTA AGGACTTTAA AAATGGGCAG TATAAAGTCA TTAGTTTTTT TGCTAAGCGG GCACGAGGAA TGATGGCAAG ATATATTATT GATCAGCAAG TGAGTTCTAT TGACGGGTTA AAAGCTTTTG AGGTTGATGG TTATTACTAC AGCGAAGAGC TCAGTAAGCC AAATGAACCA ACCTTCCTGC GGGAAGCACA GTAG
|
Protein sequence | MLILVSPAKT LDFEQPPLTQ IHTRPDFLAQ SQELIQVCQQ LTPSDIATLM KVSDSIAGLN AARFGEWKPD YSIDNAKQAI FAFRGDVYTG FDADTLTAAQ LERTQSQLRI LSGLYGLLRP LDLILPYRLE MGTALTNQKG KNLYEFWGNT LTDAVNSAVA AQGDGIIINL ASNEYFKAIK PKFLNGQLIT PVFKDFKNGQ YKVISFFAKR ARGMMARYII DQQVSSIDGL KAFEVDGYYY SEELSKPNEP TFLREAQ
|
| |