Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3534 |
Symbol | mviN |
ID | 1171207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3689664 |
End bp | 3691223 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637345335 |
Product | MviN protein |
Protein accession | NP_719081 |
Protein GI | 24375038 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTAAAA AATTATTGAA ATCTGGCATG ATTGTTAGTG CTATGACGTT GATTTCTCGT GTTTTAGGTT TGGTTCGAGA TGTTGTCGTT GCAAATTTAC TGGGGGCAGG GACGAGCGCC GATGTTTTTT TCTTCGCGAA TAAAATCCCT AACTTTTTAC GCCGATTATT TGCCGAGGGG GCTTTTGCTC AGGCATTTGT TCCCGTACTG ACCGAATATC AAGAAAAACA TACCTCGGAC GAAACCCGCG AGTTACTCAG CAAGGTTGCT GGTACGTTAG GTTTATTGGT CACTGTCGTG ACGCTTGTCG GTGTGATAGC CTCACCTGTG TTATCCGCCT TATTTGGCGG AGGCTGGTTT GTTGCTTGGT TGAATAATGA GCCCGATGGT GCCAAGTTTG AACTGGCAAC GGTCGTGCTT AAAATCACTT TTCCTTATCT GTGGTTTATC ACCTTTACTG CCTTAGCTGG CTCAATCCTA AATACTCGAG GACGCTTTGC TGTATCGGCT TTTACGCCAG TATTTTTAAA TGTGGCCATT ATTGCGGCGG CTATGTTTTT TGCACCAACG TCTTCTCAGC CAGAAATTAC TTTGGCGTGG GGAGTATTTT GGGGTGGTTT AATTCAGTTT TTATTCCAAA TTCCGTTTTT GCTTCGTGAA AAAGCGTTAG TTAAGCCTTC GTGGGGATGG AATCATCCTG GGGTTGTGAA GATCAGAACT TTGATGATCC CTGCGTTATT TGGAGTTTCT GTCTCACAAA TCAACTTATT ATTTGATACC TTTATCGCCA GTTTCCTGAT GACTGGCTCC ATTAGTTGGC TTTATTATTC TGACCGTTTA TTGGAGTTTC CACTTGGTTT ATTCGGTATT GCAATTGCAA CCGTGATTTT ACCTGCGTTA TCTCGCAACC ATGTGAATGC CGAAGGAGAT GGCTTTGGTA AAACCATGGA TTGGGGGATT AAAGCGATTC TTTTGCTCGG TTTACCTGCC ATGATGGGGT TGATTGTGCT TGCACAGCCG ATGTTAATGG TGTTGTTTAT GCGTGGTGCC TTTACTATCA ATGATGTGCA AATGGCATCC TACAGTTTGA TGGCTTACGG TAGTGGCCTA CTGAGCTTTA TGCTAATCAA GGTGTTAGCA CCTGGATATT ACTCTCGCCA AGATACTAAA ACTCCAGTCC GTTACGGCAT TATCGCCATG ATCACCAACA TGGTCTTTAA CTTAATATTT GCAATCCCGT TTGGTTATGT GGGGTTGGCT GTGGCCACAT CAATGTCAGC CTTGCTAAAT GCTACATTGT TATACCGCGG CCTGCATAAA GCGGGAGTTT ATCGCATTAC CAAACCAACG ATGGTGTTTT TCCTAAAAGC CGTGGTCTCG ACGGCATTGA TGGTGGTAGT CTTGTACTAT TTGTTACCAT CGCAATCCCA GTGGTTAGAG TGGGGCTTGG CTTTGCGCGC TAAGGCCTTG ATTGGTTTAA TTGTTGTTGG CGCTATGACG TATTTAGTTG GGCTCTTGGC GTTGGGAATT CGTCCTTGGT CAATGAAACG GGGAGTTTGA
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Protein sequence | MSKKLLKSGM IVSAMTLISR VLGLVRDVVV ANLLGAGTSA DVFFFANKIP NFLRRLFAEG AFAQAFVPVL TEYQEKHTSD ETRELLSKVA GTLGLLVTVV TLVGVIASPV LSALFGGGWF VAWLNNEPDG AKFELATVVL KITFPYLWFI TFTALAGSIL NTRGRFAVSA FTPVFLNVAI IAAAMFFAPT SSQPEITLAW GVFWGGLIQF LFQIPFLLRE KALVKPSWGW NHPGVVKIRT LMIPALFGVS VSQINLLFDT FIASFLMTGS ISWLYYSDRL LEFPLGLFGI AIATVILPAL SRNHVNAEGD GFGKTMDWGI KAILLLGLPA MMGLIVLAQP MLMVLFMRGA FTINDVQMAS YSLMAYGSGL LSFMLIKVLA PGYYSRQDTK TPVRYGIIAM ITNMVFNLIF AIPFGYVGLA VATSMSALLN ATLLYRGLHK AGVYRITKPT MVFFLKAVVS TALMVVVLYY LLPSQSQWLE WGLALRAKAL IGLIVVGAMT YLVGLLALGI RPWSMKRGV
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