| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3533 |
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| Symbol | ribF |
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| ID | 1171206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3688663 |
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| End bp | 3689598 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637345334 |
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| Product | riboflavin biosynthesis protein RibF |
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| Protein accession | NP_719080 |
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| Protein GI | 24375037 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0196] FAD synthase |
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| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTAA TCCGCGGTAT ACATAACATT TTGTCATCTC ACCATGGCTG TGTGCTGACG
ATAGGTAATT TTGATGGCGT GCATCGCGGT CATGCACAGG TGATTGCTAA TCTCGTGCAA
AAGGCCAAGC AGCTATCGTT ACCCCCGACT GTCATGACAT TTGAGCCTCA GCCACAGGAG
TTATTCCGTG GTGAAAATGC GCCCGCGCGT TTGAGCTTAC TACGTGACAA AATTGTCTTG
CTTGATGAGT TAGGCGTTGA GCGGTTAGTG TGTGTTAACT TTAACCGTGC CTTTGCTGAT
CAACCTGCGG AGCATTTCAT TGAAGAATTG CTGGTGCGTA AGTTAGGGAT TAAGTATCTC
GTTGTCGGCG ATGATTTTTG TTTTGGCAAA GGCCGGAAAG GCGATTTTGA CATGCTGAAG
CAAGCGGGAA CCCGATATGG CTTTACCGTG GTTAGCACCC AGAGTTTTAT CGTGGGATCG
CAACGCGTCA GTTCTACTGC CGTCAGAGAG CAATTGGCTA AAGGTAACCT TGAGCAGGCA
AGACGGCTAC TCGGTCATCC TTTTACCTTA AGTGGCCGTG TTGCACACGG GCAAAAAATC
GGTAGAACCA TAGGTTTCCC TACCGCCAAT ATTGCGCTTA AGCGCAATGT GGTGCCTGTG
CGCGGGGTAT TTGCGGTGAA ACTCTATTGG GAAGATAGCG ATATTTATGA GGGTGTTGCC
AATATAGGTT TCCGCCCGAC GGTGAATGGT CAAATTTGCC AGCTTGAGGT TCATCTTTTG
GATTTTGAAG GTGACATTTA TGGCAAACAT GTTGAGGTTG AGTTAGTGGC AAAACTTCGC
GATGAACAAC CTTTTGATTC ATTGGATGCC CTAAAACAAC AGATTTTGAA TGATGCAAAT
GAGGCCAGAG CTTTATTTGG TAACGATGCA GGCTGA
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| Protein sequence | MELIRGIHNI LSSHHGCVLT IGNFDGVHRG HAQVIANLVQ KAKQLSLPPT VMTFEPQPQE
LFRGENAPAR LSLLRDKIVL LDELGVERLV CVNFNRAFAD QPAEHFIEEL LVRKLGIKYL
VVGDDFCFGK GRKGDFDMLK QAGTRYGFTV VSTQSFIVGS QRVSSTAVRE QLAKGNLEQA
RRLLGHPFTL SGRVAHGQKI GRTIGFPTAN IALKRNVVPV RGVFAVKLYW EDSDIYEGVA
NIGFRPTVNG QICQLEVHLL DFEGDIYGKH VEVELVAKLR DEQPFDSLDA LKQQILNDAN
EARALFGNDA G
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