Gene SO_3528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3528 
Symbol 
ID1171201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3683128 
End bp3683691 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content43% 
IMG OID637345329 
Producthypothetical protein 
Protein accessionNP_719075 
Protein GI24375032 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4967] Tfp pilus assembly protein PilV 
TIGRFAM ID[TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAT TCGAACGGTT GACACATCAA GGATTTCAAC GAGGCTTCTC ATTAATTGAA 
GTACTTGTTG CATTGGTGAT CCTCGTAATT GGTTTGATTG GTATTTTTAA TCTACATATC 
GTTGCTAAAC GAGGCAGCTT TGAGTCTTTT CAGCAGACTC AAGCTTCATA CTATGCTAAT 
GACATCATTA ACCGGATGAA ACTTAATCGA ACTCAATTAG CCAATTATAG CGGTGAATAT 
ACAGGGGCGC TGAGTAAACC CAATAAAGAG TGCGATGTAG CTGTTGGGGC TGTCAGTCTG 
TGTTCTTCAG TCGAAACTCA AGCTTGGGAT CTATATCAAT GGGAGCAAAG TATTATCGGT 
GCAGCTGAAA CTGTTGGCGG GCAGAATGTG GGGGGATTAG ATTCTCCAAC GGCTTGTATT 
GATATTGATG GTACGACAGT CACTGTTGCT GTGGCATGGA GAGGTATTCG TGAGGGCGCT 
GGAACCACAT ATTCTGGAAA TGAGTGTGGT GAGGATCTTG GCACTCGTAG GCGTATTTTT 
GTCGTGTCGA CAGTGATTAT TTAG
 
Protein sequence
MTKFERLTHQ GFQRGFSLIE VLVALVILVI GLIGIFNLHI VAKRGSFESF QQTQASYYAN 
DIINRMKLNR TQLANYSGEY TGALSKPNKE CDVAVGAVSL CSSVETQAWD LYQWEQSIIG 
AAETVGGQNV GGLDSPTACI DIDGTTVTVA VAWRGIREGA GTTYSGNECG EDLGTRRRIF 
VVSTVII