| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3502 |
|---|
| Symbol | |
|---|
| ID | 1171176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 3652595 |
|---|
| End bp | 3653437 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637345304 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_719049 |
|---|
| Protein GI | 24375006 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTCAC AGCAACGGGG ATTCCTAGGC TGTTGTTTGG CAAATCATCG GATGTATAAG
CCTGTTTTTA AACACCAAAC TTCGTATATC CGTGTCAATC AAGCAAATGG GAGAAATACC
GTGAATAACA ATCTACAGAA AAAACGGCTA GCACAACTTG CAGGGCTTGC GCTGACCACC
AGCTTATTTT CTAGCATAGC CGCTGCTGAA GTGTCTGGAA ATATCAGCTT GACTAACGAT
TATCGCTTCC GGGGGGTCTC ACAAACGGCT GGCGATTTCG CGGTGCAAGG GGGTATCGAT
TGGAGTTTTG AGTCAGGGTT CTCCGTCGGT GCATGGGCGA GTAATTTGGA CTATGATACG
CCAGATTATA ACGGCCCAGA TATCGAGTAT GATTTCTATG CTGCCTACGG CGGTGAAGTT
CACGATAACC TCAGCTATGA CATCACACTT TATCGCTATA ACTATTCTGG CGAGAGTGAT
TTAGGCTATT TTGAAATGAC TGCGGGAGTC GAGTTTAGCG GATTTCGCGT GGCGTATTGG
TATACCAATG ACTTCGGTGG CAGTGATTTA GACTACCACT ATGGTGAACT CAATTACTCC
TACGAGTTTA TTGAACACTG GAGCCTCAAT CTGCACTACG GTTACAGCAT TGGCGATGCG
TTAGATGATG GTGAAGACTT TGATAGTTAT TCAGATTATT CAGTTGTCGT CTCCACTGAA
TTATTGGGAT TGGGCCTATC ACTGGCTTGG CTTGGCACTG ATTTAAGTAG TGAGAAGAAA
GTCTCTGATG GTGTATTTCA AAATGATGAT ACCGTACTCG CAAGCGTCAG TTACGCCTTC
TAA
|
|---|
| Protein sequence | MRSQQRGFLG CCLANHRMYK PVFKHQTSYI RVNQANGRNT VNNNLQKKRL AQLAGLALTT
SLFSSIAAAE VSGNISLTND YRFRGVSQTA GDFAVQGGID WSFESGFSVG AWASNLDYDT
PDYNGPDIEY DFYAAYGGEV HDNLSYDITL YRYNYSGESD LGYFEMTAGV EFSGFRVAYW
YTNDFGGSDL DYHYGELNYS YEFIEHWSLN LHYGYSIGDA LDDGEDFDSY SDYSVVVSTE
LLGLGLSLAW LGTDLSSEKK VSDGVFQNDD TVLASVSYAF
|
|---|
| |