| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3496 |
|---|
| Symbol | |
|---|
| ID | 1171170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 3646143 |
|---|
| End bp | 3647639 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637345300 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | NP_719045 |
|---|
| Protein GI | 24375002 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACAC CTAAAACACG GAGCGATTGG GAAAACCTCG CTGTAAGCCT AGCAATCAAT
GGCAAGGCTT TTATTAATGG CGAATACCGC GATGCGTCAT CGGGTAATAC CTTTGATTGC
ATCAGTCCAA TCGATGGCCG TTTATTAGCG CCAGTTGCCA GTTGCGATTT GATGGACGCC
AATATTGCTG TGGCCAATGC TCGTGAGGTT TTTGACTCTG GGGTATGGTC AAAGGCGGCG
CCTGTTAAAC GTAAACAAGT GATGATCCGT TTTGCCGAGT TATTGGAAGA AAACGCCAAT
GAGCTGGCCC TATTAGAAAC GTTGGATATG GGCAAACCGA TACGTTTTTC AAAGGCGGTG
GATGTTGCTG GTGCTGCCCG TGCCATCCGT TGGTCAGGGG AAGCGATTGA CAAACTTTAT
GACGAACTGG CGCCTACTGC GCATAATGAA ATCGGCATGA TCACCCGTGA ACCCGTGGGC
GTGGTGGCGG CGATTGTGCC TTGGAATTTC CCGCTGCTAA TGGCCTGTTG GAAGTTAGGT
CCAGCGCTCG TTACGGGGAA CAGTGTTATC CTTAAACCCT CTGAAAAATC ACCGCTCACC
GCCATTCGTA TTGCCGAGCT TGCCGTTCAA GCTGGGATCC CTAAAGGTGT ATTAAACGTG
CTACCAGGCT ATGGCCATAC TGTCGGCAAA GCACTGGCGC TGCATATGGA TGTCGATACC
TTAGTCTTTA CTGGCTCAAC AAAAATCGCT AAGCAATTAA TGATTTATGC GGGCGAGTCG
AATATGAAGC GGGTCTGGTT AGAGGCGGGC GGTAAAAGCC CGAACATCGT ATTTAACGAT
GCGCCTGATC TTAAGGCTGC GGCGGTGGCT GCCGCTGAAG CCATTGGCTT TAACCAAGGT
GAAGTTTGTA CTGCGGGTTC ACGTTTGCTG GTGGAATCTG GTGTTAAAGA TGAGCTTGTT
GGACTTATAG CTGAAGAGTT GGCTTCTTGG CAGCCCGGTC ATCCACTCGA ACCAACGACT
GTCAGTGGTG CCGTGGTCGA TAAGCAGCAG CTTGACACCA TCTTAAGCTA CATCAAGGCT
GGGCAAAATG AGGGGGCAAG CCTAGTCTAT GGCGGGCAAC AAGTGCTGGC CGAAACGGGC
GGTGTGTATG TGCAGCCAAC GGTATTTTCA AATGTGAAAA ACCAAATGAA AATTGCCAGC
GAGGAAATCT TTGGCCCTGT ATTATCTGTT ATTGAATTCA ATGGTATGGA GGAGGCGATT
GCGATCGCTA ACGATACCAT TTACGGTTTA GCGGCAGGTG TTTGGACGGC GGATATCAGC
AAGGCGCATA AAACGGCTAA AGCATTGCGT AGTGGCATGG TGTGGATTAA CCATTATGAT
GGTGGCGATA TGACCGCACC TTTTGGTGGT TATAAACAGT CTGGTAATGG CCGAGATAAA
TCTCTGCATT CCTTTGATAA ATACACTGAA ATCAAGGCAA CTTGGATAGT GTTATAA
|
|---|
| Protein sequence | MSTPKTRSDW ENLAVSLAIN GKAFINGEYR DASSGNTFDC ISPIDGRLLA PVASCDLMDA
NIAVANAREV FDSGVWSKAA PVKRKQVMIR FAELLEENAN ELALLETLDM GKPIRFSKAV
DVAGAARAIR WSGEAIDKLY DELAPTAHNE IGMITREPVG VVAAIVPWNF PLLMACWKLG
PALVTGNSVI LKPSEKSPLT AIRIAELAVQ AGIPKGVLNV LPGYGHTVGK ALALHMDVDT
LVFTGSTKIA KQLMIYAGES NMKRVWLEAG GKSPNIVFND APDLKAAAVA AAEAIGFNQG
EVCTAGSRLL VESGVKDELV GLIAEELASW QPGHPLEPTT VSGAVVDKQQ LDTILSYIKA
GQNEGASLVY GGQQVLAETG GVYVQPTVFS NVKNQMKIAS EEIFGPVLSV IEFNGMEEAI
AIANDTIYGL AAGVWTADIS KAHKTAKALR SGMVWINHYD GGDMTAPFGG YKQSGNGRDK
SLHSFDKYTE IKATWIVL
|
|---|
| |