Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3478 |
Symbol | |
ID | 1171154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3624614 |
End bp | 3625372 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637345284 |
Product | ISSod6, transposase |
Protein accession | NP_719027 |
Protein GI | 24374984 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAGAC TTATGCTAAC CGATGCACGC TGGGAAAAGC TATTTCATTT AATGAAAAGC ACAGGCCGTG TTTATGACAA ACCTGAACAT AGACAAACAT TCGAAGGTAT TCTTTACCGC CTTAGAACAG GTATCCCTTG GCGAGATTTA CCTAAAGAGT TCGGTCATTG GAGCACGGTC TTTAGACGGT TTCATTTATG GTCTAAGAAA GGCGTTCTAG CACATTTATT CAAGGCCTTA GCCAACCTTG CTGATATAGA ATGGGTCTTT ATTGATGGCT CGATAGTGCG AGCTCACCAG CACAGTGCAG GTGCAGCGAC GCTAAGTAAT GAGAGTATTG GTAAAAGTCG AGGCGGTAAT TCAACCAAAA TTCACTTAGC CGTCGACAGC GGAGGATTAC CGATTTATTT CGAATTATCA GAAGGCCAAA AACACGATAT TACACACGCC CCCAGCTTAA TTGAGCACCT GAAGCAGGTT GATACCGTCA TTGCAGATAA AGGTTATGAC AGCGATGCTT TTCGTGAACT TATCGCCAAT AAAGGCGGGA AATCTGTTAT TCCAAGGCGC CGCTATAAGA ATACACCTCA AGAAAGAGTC GATTGGTGCT TATATCGGTA TCGACATTTA GTGGAGAATG CTTTTGGAAG AATAAAACAC TATCGAGCAA TATCAACAAG ATATGACAAG CTAGCAAGAA ATTACGCCAG TATGGTGTCA CTGGCGTTTA TGTTAATGTG GTTGCCGATG TATTGCTGA
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Protein sequence | MPRLMLTDAR WEKLFHLMKS TGRVYDKPEH RQTFEGILYR LRTGIPWRDL PKEFGHWSTV FRRFHLWSKK GVLAHLFKAL ANLADIEWVF IDGSIVRAHQ HSAGAATLSN ESIGKSRGGN STKIHLAVDS GGLPIYFELS EGQKHDITHA PSLIEHLKQV DTVIADKGYD SDAFRELIAN KGGKSVIPRR RYKNTPQERV DWCLYRYRHL VENAFGRIKH YRAISTRYDK LARNYASMVS LAFMLMWLPM YC
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