Gene SO_3470 details

Gene Information

• Locus tag: SO_3470
• Symbol: nrdR
• ID: 1171146
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 3615391
• End bp: 3615840
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637345276
• Product: transcriptional regulator NrdR
• Protein accession: NP_719019
• Protein GI: 24374976
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTGTC CATTTTGCAG CGCGACAGAT ACCAAAGTGA TCGATTCCCG ATTAGTGGCG 
GAAGGCCATC AAGTGCGTCG CCGTCGAGAA TGCACCGAAT GCCACGAACG ATTCACCACC 
TTCGAAGGTG CCGAATTAGT GATGCCACGG GTGATTAAAC GTGATGGCAC GCGCCAACCC 
TTCGATGAAG AAAAATTGCA AGCGGGCATG TTGCGTGCGG TCGAAAAGCG CCCCGTCTCC 
ATGGATGAAA TCGAGCAGGC CTTAAGTAAA ATTAAATCGA CACTACGGGC TACTGGCGAG 
CGTGAAGTGC CTTCAGAGAT GATAGGTAAC TTGATGATGG AGCAGTTAAT GAGCCTAGAT 
AAAGTCGCCT ACATTCGTTT CGCATCGGTT TATCGCGCCT TTGAGGATGT CTCCGAATTC 
GGTGAGGCGA TTGCTAAGCT GCAAAAATAG 

 

Protein sequence

MHCPFCSATD TKVIDSRLVA EGHQVRRRRE CTECHERFTT FEGAELVMPR VIKRDGTRQP 
FDEEKLQAGM LRAVEKRPVS MDEIEQALSK IKSTLRATGE REVPSEMIGN LMMEQLMSLD 
KVAYIRFASV YRAFEDVSEF GEAIAKLQK