Gene SO_3468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3468 
SymbolribE-2 
ID1171144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3613508 
End bp3614164 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content48% 
IMG OID637345274 
Productriboflavin synthase subunit alpha 
Protein accessionNP_719017 
Protein GI24374974 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACTG GGATTATTGA GGCCGTTGGT ACACTGCGAA AGCTTGAGCG TAAAGGCGAT 
GATATTCGCT TAACGGTCGC CAGTGGCAAA CTGGATTTAA CCGATGTGCG TTTAGGCGAC 
AGTATCGCCA CCAACGGTGT ATGTTTGACC GTGGTTCAAC AGTTAGCCGA TGGCTATGTG 
GCTGATGTGT CAGCTGAAAC CGTCAGCCTT ACAGGTTTTG CAAACTATAA AGTGGGTACT 
AAGGTCAATC TTGAAAAGGC CGTCACCCCA ACTACTCGTT TAGGCGGCCA TATGGTGAGT 
GGTCATGTGG ATGGGATTGC TACTGTTGAG CAGCGTCTTG CTCGTGGTCA AGCAATCGAA 
TTTTGGTTAG CGGCTCCCAC GGAGCTTGCT CGCTATATTG CCCATAAAGG TTCTATCACG 
ATTGATGGCG TGAGCCTGAC AGTAAACGAA GTCGATGGAC ACCGTTTTCG ATTAACGATT 
GTGCCCCATA CTGCAGGTGA AACCACGTTG GTGGATTTAA AAGCAGGCGA TAAGGTCAAT 
ATTGAAGTGG ACTTAATTGC CCGTTATTTA GAGCGTTTAA TGCGTTTTGA CAGCAAAGAA 
ACCCAAGGCG GAGGGGTGAC CATGGAAATG TTAGCCCGTG CTGGCTTTGT GCGTTAG
 
Protein sequence
MFTGIIEAVG TLRKLERKGD DIRLTVASGK LDLTDVRLGD SIATNGVCLT VVQQLADGYV 
ADVSAETVSL TGFANYKVGT KVNLEKAVTP TTRLGGHMVS GHVDGIATVE QRLARGQAIE 
FWLAAPTELA RYIAHKGSIT IDGVSLTVNE VDGHRFRLTI VPHTAGETTL VDLKAGDKVN 
IEVDLIARYL ERLMRFDSKE TQGGGVTMEM LARAGFVR