Gene SO_3467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3467 
SymbolribBA 
ID1171143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3612338 
End bp3613441 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content49% 
IMG OID637345273 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative 
Protein accessionNP_719016 
Protein GI24374973 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGC ACAGTATAGA AGAGATCATC GAGGATATTC GTCAAGGCAA AATGGTTATT 
TTGATGGATG ACGAGGACAG AGAAAACGAA GGCGATCTGA TTTTGGCGGC CGAAATGGTG 
ACGCCAGAAG CGATTAACTT TATGGCGAAA TACGGCCGCG GGTTAATCTG CCAAACGATG 
ACCAAGGCCC GTTGCCAGCA GTTAAATCTG CCCTTGATGG TAACCAATAA CAATGCGCAG 
TTCTCGACCA ACTTTACGGT ATCGATTGAA GCTGCCGAAG GCGTAACCAC AGGGATTTCG 
GCCCACGATC GCGCTGTAAC CGTTAAAGCG GCCGTAGCAA AAGATGCTAA AGCGTCGGAC 
TTAGTTCAGC CTGGGCATAT CTTCCCGTTA ATGGCGCAGG ATGGTGGCGT ATTAACCCGC 
GCAGGTCACA CTGAAGCGGG CTGTGATTTA GCCCGTTTAG CAGGGCTTGA ACCATCGGGG 
GTGATTGTTG AAATTTTGAA CGAAGACGGC ACTATGGCCC GTCGCCCAGA TTTAGAGATT 
TTCTCTGAAA AACATGGCAT TAAAATCGGC ACTATTGCGG CCCTGATTGA ATACCGTAAT 
ACCAAAGAAA CGACCGTTGT GCGTGAAGCC AAATGCAAAC TGCCAACCCG TTTCGGTGAG 
TTCGATATGG TGACCTTTAG GGATACTATC GACAATCAAT TGCACTTTGC CTTAGTGAAA 
GGCGAGGTGA AGCCTGACTG TTTAGTACGG GTACATTTAC AGAATACCTT TAACGATCTA 
CTTCACTCTG AGCGTGATCA GCAACGTAGC TGGCCGCTCG AAAAAGCGAT GGCGCGGATT 
TCTGCCGAAG GTGGTGTATT AGTACTGCTT GGCAATCAGG AACATTCCAG TGAAATCCTC 
GCCAAAGTCA AAGCCTTTGA AGCGGAAGAT CAAGGTCAGA CCCCAGTATC GGCTAAATGG 
CAAGGCACCT CACGCCGTGT AGGTGTGGGT TCGCAAATCC TCGCCAGTTT AGGCGTGACA 
AAAATGCGAC TCTTAAGCTC GCCCAAACGT TATCACTCAC TTTCAGGCTT TGGCCTTGAA 
GTGACCGAAT GCGTAGCTGA GTAA
 
Protein sequence
MALHSIEEII EDIRQGKMVI LMDDEDRENE GDLILAAEMV TPEAINFMAK YGRGLICQTM 
TKARCQQLNL PLMVTNNNAQ FSTNFTVSIE AAEGVTTGIS AHDRAVTVKA AVAKDAKASD 
LVQPGHIFPL MAQDGGVLTR AGHTEAGCDL ARLAGLEPSG VIVEILNEDG TMARRPDLEI 
FSEKHGIKIG TIAALIEYRN TKETTVVREA KCKLPTRFGE FDMVTFRDTI DNQLHFALVK 
GEVKPDCLVR VHLQNTFNDL LHSERDQQRS WPLEKAMARI SAEGGVLVLL GNQEHSSEIL 
AKVKAFEAED QGQTPVSAKW QGTSRRVGVG SQILASLGVT KMRLLSSPKR YHSLSGFGLE 
VTECVAE