| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3461 |
|---|
| Symbol | |
|---|
| ID | 1171137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 3606889 |
|---|
| End bp | 3607848 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637345267 |
|---|
| Product | transporter, putative |
|---|
| Protein accession | NP_719010 |
|---|
| Protein GI | 24374967 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTT TAACCCCTCT GTTTGCCGTC TTCGGGATCA TGCTACTGGG CACACTTGTG
CAAAAACTGC GTTTTCTCCC AGTTGAAACC GACCAAGTGC TCAATCAATA TGTCTACTAT
ATTGCGTTTC CTGCTGTACT CTTGATTGCA CTGGCGCAGC AACCGATTGA GGAAATTCTG
CAATGGCGGT TTATCGCAGG CTACAGTGCC GCCATGCTGG TGATTTACCT AATGTGTATT
GGTATATCAT TACTCGTTAA CCCAAAACAG CATGCTATCG CCGCCGTGCG CGCCCTCAAC
GCCACCTTTG GCAATACCGC ATTTATTGGT ATTCCGCTGC TGGTGATTAT ATTTCCTGAA
CAACAAAGCG CCCTGGTCGC CGCCATAGCC AGTTTATTGT CCGTGCTTAT GTTTGCTGTG
GCCTTGGTCT CGCTGGAGCT TACGACAAAT AAACACAGAC AACACCACGC TGTGGTAATT
ATGTGTTTGG CCATCACTAA AAACCCCATC GTTATCGGCT GCTTTATCGG CATTAGTATC
TCGGCGCTTG GGATCACACT GCCGTCTGGC GTGGCATTAA TGATCCAACA AATAGGTAAT
ACCTCAAGCC CCTGCGCCCT ATTTGCCGTC GGCATGGTAT TAGCTAAAGC CATGCGTTAC
CAAAAAGATA GTAAGTTATT CAGCCTGACA AATTTTGTCG AACTGTGCCT TATCAACCTC
TTTAAATTAA TCCTACAACC CGCATTGGTT TTCTTCATGC TTAAAAGCAT TGGCGTTACA
GGAGATTACT TAGTAATGGG CGTTATCCTC AGTGCCTTAC CTACGGCGGC CAGTGTCTAT
TTACTTGCTC AGCGCTATAA CACCCAAGCC TCAACCTGTG CGCAGGGGAT ATTATTTGGC
ACTATTGTGA CTTTTTTCAG CTTGCCCATT TTAGAACAAC TTGTTAAAAC CTATTCATAA
|
|---|
| Protein sequence | MTILTPLFAV FGIMLLGTLV QKLRFLPVET DQVLNQYVYY IAFPAVLLIA LAQQPIEEIL
QWRFIAGYSA AMLVIYLMCI GISLLVNPKQ HAIAAVRALN ATFGNTAFIG IPLLVIIFPE
QQSALVAAIA SLLSVLMFAV ALVSLELTTN KHRQHHAVVI MCLAITKNPI VIGCFIGISI
SALGITLPSG VALMIQQIGN TSSPCALFAV GMVLAKAMRY QKDSKLFSLT NFVELCLINL
FKLILQPALV FFMLKSIGVT GDYLVMGVIL SALPTAASVY LLAQRYNTQA STCAQGILFG
TIVTFFSLPI LEQLVKTYS
|
|---|
| |