| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3457 |
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| Symbol | |
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| ID | 1171133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3601942 |
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| End bp | 3604749 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637345263 |
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| Product | hybrid sensory histidine kinase BarA |
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| Protein accession | NP_719006 |
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| Protein GI | 161486828 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCTG TCAACAACAT GACCAAATAC AGCTTACGTT CTTGGGTTCT GGTGCTAGCG
CTTGCGCCGA CGATCTTAGT CGGTATTCTG CTGGGCAGCT ACTTTACCAT AAATCGCTTC
TATGAACTCG AAGATACGCT GATTGAACAG GGCAGTAATA TTATCGAGCC CTTGGCAATT
GCCAGCGAAG TGGGACTGGT TGGCAATGAT AGGGAAGCGA CTAAGAGACT CCTTGCCGCC
GCCCAACTCA ATAAATCCAC GCTCGTAAAA TCCATTGCCA TTTTTGACAT TCATAATCAA
CTCTTTGTCA CATCGCATTA CCACAAAGAT TTCGAGATCA TGCGCTACAA AGAAGCGCTA
ACCAATCTGC AAAAAACCGA AATAGAACAT GTGGGCGACA GTCTTATTCT ACGCACGCCC
ATCTTTGCGA CTGCAACGCC CACGGGGAGT GAGCCTGCGA ATGTTGATAT CCAAACCGAT
AATGGCGAGT TACTCGGCTA TATCTCGGTA ATTATCAATA AAGAACGCGC CTTGCTCGAA
CAACACAGAG CCGCCGTGGC CGCCTTTATT ATCGTGTTGA TTGGGGTGCA ATTAAACCTG
CTGTTTACCT TTCGATTAGT CAAAAACGTC ACCCAACCCA TTACCGAAAT GGTGCGAGTC
GTCGCTAAAA TTCGTGAGGG TAAACTGGAT GCTCGGCTTC AAGGAAATCT GATTGGTGAG
CTGGATCTGC TTAAACGCGG TATTAACGCC ATGGCAGGCT CGTTATCGGA ATATCACGAT
GAAATGCAGC AAAATATCGA TCAGGCGACC TCTGATTTGC GGGAAACCTT AGAGCAAATC
GAAATCCAAA ACGTTGAGCT CGATTTAGCC AAAAAACGCG CGTTAGAGGC CAGCCGGATT
AAGTCTGAGT TTTTGGCTAA TATGTCCCAC GAGCTGCGCA CACCGCTTAA TGGTGTGATT
GGTTTTGCGC GCCAGTTAGT AAAAACCCCA TTGCACTCTA GCCAAGTGGA TTACATTAAT
ACCATCGAAC GTAGTGCCAC TAATCTGCTG GCCATTATCA ACGATATTCT CGACTTCTCT
AAACTCGAAG CCGGTAAAAT GGTGCTAGAA AGCATGCCAT TTGGTTTAAG GGAAACCCTG
GGTGAAACCA TCACCTTAAT CTCCGGTAGC GCACAGGCCA AGGGGCTTGA GTTAGTTGTC
GATATCGCGC CGAATGTCCC CGACAATGTC AATGGCGATT CGATGCGTGT TTGTCAAATT
ATCAATAACT TAGTTGGCAA CGCTATCAAG TTTACCGACT CAGGCAGCGT ACTGGTTAAA
TTAGAATTAC AAGCCCAAAC CGATGAGCAG GTTGTGCTGC GCTGTGATGT TATCGATACC
GGGATTGGGA TCGATGAAAG CCAGCAGGAC TTCCTCTTCC AAGCCTTTGG TCAAGCCGAC
TCATCGATAT CTCGCCGTTT TGGCGGAACA GGGCTTGGGC TGGTGATCAC TAAGCGGCTC
GTCAATCAAA TGGGCGGACA AATAGGCTTT ACCTCGTCGG TGGATAAGGG CTCTAACTTC
TGGTTTACTC TGCCGTTAGG CCTTGGTCAG TTCCAAATTG GCGATTCGTT GCCTCTTGAA
AAACTACAAA ATAAAACCGT GCTCTTTTAT GAGCCAAGAG TGCTCACCCA TTCAGTGATT
AGTCGTCAGT TAAAACAATG GGATACTAAG GTCACTCACC ATCAGCATAT TCCTAGTTTA
CAGACAACCC TATCAACGAC TGAGCATCAA TTTGATTATG TGTTGTTAAG TTGCCATGGG
TTTAACAATC CAAACCATTT GGTCAGCACC TTAATTCAAG CCAAAGCTAA AACGGATTGT
TTGATTGTGC TGTTCGACTG CCAAGAACAA GACATGTTAA GCCAATTTAT TCGCCCCAAT
GCTGACGTGG TGTTATCACT GCCCGTAAGC GAACACCAAC TGGCGCGTAA TATGCTCTAC
CCACCGATGG AATATGACCT ATTACCGCCC GTAAGCATTG CTGTACCTGC AGCCCGCCAA
TCGCTTACCG TATTAGCGGT GGATGATAAC TTCGCCAATT TAAAGCTTAT AGATACCTTA
CTCAATGAGT TAGTCACTAC CGTTATCGCC GTCAATAGCG GTGAGGAAGC GGTAAAACAG
GCGAAGACTC GCACTTTTGA TCTTATCTTT ATGGATATTC AAATGCCGGG CACCGATGGC
ATCAGTGCCA CCAAACAAAT TCGCCAAGGT TCGATGAACC GCAATACGCC GATTATTGCC
GTGACCGCCC ATGCGATTGC CGAGGAGCGC GAGCTGATTT TAGGTAGCGG CATGGATGGT
TATTTGCCCA AACCCATAGA TGAAGCCGCA CTTAAAGCGG AGATTAACCG CTGGATCACG
CGGCCTAAAT TCACTCACTT TGATTTACAT ACCCTCAACT GGGATCTATG CCTGACCCAA
GCTAACCATA AGTCGGGCTT AGCGTTAGAT ATGCTACGTA TGCTGCTCGA TTCTCTGCCT
CAAACTGTAT CAGCCATAGA AGCGGCATTG AGCCAGAACG ATCAAGTAAC GATGCTCAGC
ACCATCCACA AACTCCATGG CGCAAGTTGC TATTGCGGGG TACCTACTAC CCAGCGTTTA
TGCCAAGAGA TTGAATCTGC GTTAAAACGT GAGGCCCGTG TTGAAGATCT CGAACCGGAA
ATACTAGAGT TACTTGATGA GCTAACTAAG GTAGAATCGG CAGCAAAACA AGTGCTATCA
CAGCTATCAG CGGAAATAAC AGATGACCAA AAAAACGGGC TTCTTTAA
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| Protein sequence | MNPVNNMTKY SLRSWVLVLA LAPTILVGIL LGSYFTINRF YELEDTLIEQ GSNIIEPLAI
ASEVGLVGND REATKRLLAA AQLNKSTLVK SIAIFDIHNQ LFVTSHYHKD FEIMRYKEAL
TNLQKTEIEH VGDSLILRTP IFATATPTGS EPANVDIQTD NGELLGYISV IINKERALLE
QHRAAVAAFI IVLIGVQLNL LFTFRLVKNV TQPITEMVRV VAKIREGKLD ARLQGNLIGE
LDLLKRGINA MAGSLSEYHD EMQQNIDQAT SDLRETLEQI EIQNVELDLA KKRALEASRI
KSEFLANMSH ELRTPLNGVI GFARQLVKTP LHSSQVDYIN TIERSATNLL AIINDILDFS
KLEAGKMVLE SMPFGLRETL GETITLISGS AQAKGLELVV DIAPNVPDNV NGDSMRVCQI
INNLVGNAIK FTDSGSVLVK LELQAQTDEQ VVLRCDVIDT GIGIDESQQD FLFQAFGQAD
SSISRRFGGT GLGLVITKRL VNQMGGQIGF TSSVDKGSNF WFTLPLGLGQ FQIGDSLPLE
KLQNKTVLFY EPRVLTHSVI SRQLKQWDTK VTHHQHIPSL QTTLSTTEHQ FDYVLLSCHG
FNNPNHLVST LIQAKAKTDC LIVLFDCQEQ DMLSQFIRPN ADVVLSLPVS EHQLARNMLY
PPMEYDLLPP VSIAVPAARQ SLTVLAVDDN FANLKLIDTL LNELVTTVIA VNSGEEAVKQ
AKTRTFDLIF MDIQMPGTDG ISATKQIRQG SMNRNTPIIA VTAHAIAEER ELILGSGMDG
YLPKPIDEAA LKAEINRWIT RPKFTHFDLH TLNWDLCLTQ ANHKSGLALD MLRMLLDSLP
QTVSAIEAAL SQNDQVTMLS TIHKLHGASC YCGVPTTQRL CQEIESALKR EARVEDLEPE
ILELLDELTK VESAAKQVLS QLSAEITDDQ KNGLL
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