Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3455 |
Symbol | relA |
ID | 1171131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3598092 |
End bp | 3600299 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637345261 |
Product | GTP pyrophosphokinase |
Protein accession | NP_719004 |
Protein GI | 24374961 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCTCTG TTCGCGAAGC GCACTTTAAT GATCCCGATT TTCATCTTGA AGAGTGGGTG GCTCGCTATG TCAGTCATGT CGATGAAGCG CAAACCTTAC TCGCCCTGAT TGCGCAGGTG GACGCCTTAC CCGCTAAGAG TCCTGCCGCG AAAAGAGAAC TGCTTGAACA TGCCCGCGAG ATGATTGAAA TTCTCGCGCC ACTGAATATG GACATAGAAA CACTGCAAGC GGCCATTCTG TTTGTGGTGT TTGATGCTGG CTTATTAAAC GAAGAAGCGA TCAAAGAAAA ATTTGGTGAG CCACTCGCGC GTTTAGTCGC GAGTGTGGTG ACCATGAATG CCATTGGTGC GTTAAAAATC AATCCCAATA GTCGCTCAAC CGAGCCGCAA ATCGACAATA TCCGCCGCAT GTTGCTGGCC ATGGTCGAAG ATGTGCGCGC GGTGGTGATT AAACTGGCCG AGCGTGTCTG TTTGCTGCGC GCCGTGAAAA ATGCCGATGA AGAAACCCGC GTTTTGCTAG CACGCGAAAT TGCCGACATC TATGCGCCGC TTGCTAACCG TTTGGGGATT GGTCAGTTAA AGTGGGAATT AGAAGATATT TCCTTCCGTT ATCTGCACCC TGATACTTAC AAAGAGATTG CAAAACAGCT AGACGGAAAA CGTTTGGATC GCGAAGTCTT TATCGAAAAT TTTGTCGAGC AATTGCAGCA GCGCCTCGAT GAGGACCATA TCCGCGCTAA GGTGTATGGT CGTCCAAAAC ATATCTACAG CATCTGGCGC AAGATGAAGG GCAAACACCT CAAGTTTGAT GAGTTGTTTG ACGTGCGCGC CGTGCGAATT GTCACCGAGC GTTTGCAGGA CTGTTACGGC GCCTTAGGGG TGGTGCACAC GCTATGGCAC CATATTCCGC GCGAGTTCGA CGACTATGTG GCCAACCCTA AACCTAATGG TTATCAATCG ATCCATACCG TTGTTGTGGG GCCTGAGGGT AAAACCGTTG AAATTCAAAT TCGTACCCAA GATATGCATG AAGATGCAGA GCTGGGGGTT GCCGCGCACT GGAAGTACAA AGAGGGCAAT CACTCCGGCA AACAAAGCGG CTACGAAGAA AAAATCAATT GGCTGCGTAA AATCCTGCAA TGGCAGGAAG ACGTGGTTGA AAGCGGCAAT TTGGTCGAAG AAGTCCGCAG CCAAGTGTTT GAAGACCGAG TCTATGTCTT TACCCCAAGC GGTGAAGTGG TCGACTTACC GCTCGGCTCA ACCGTGCTCG ACTTTGCCTA CTATATTCAC TCGCAGGTCG GTCATAAGTG TATTGGCGCT AAGGTTGATG GCCGCATTGT GCCGTTTACC TATCAAGTCG AAACTGGCGA GCGTATCGAG ATCATCACCT CGAAACACCC TAATCCTAAG CGCGATTGGC TCAATCCAAA CTTAGGTTAT ATCCGCACAT CGCGGGCGCG CTCGAAAATT CAGCATTGGT TTAAGCAGCA AGACCGCGAT AAAAATATTA TCGCCGGTAA AGAGATGCTC GAAGCCGAGT TGGCGAGAGT CAGCCTGAGA ATTAAAGATG CCACCATTGC CGTTGAGCGC TTTAATATGG CGAGTATGGA CGATTTACTC GCCGCTATCG GCGGCGGTGA TGTGCGTTTG CATCAAGTCG TTAACCATAT TCAAAGTAAG TTGCGCCTCG ATGAAGCCAG TGAAGAAGAT GCGGTAGAAG AATTAGTTAA AAAGAGCCAA TCTAAATCTG GCACCAACAG CCGTGGGCAG GTTGAGGTGA ATGGTGTGGG TAACTTACTC AGCCATATCG CCCGTTGCTG CCAGCCCGTG CCCGGGGATG AGATTTTAGG CTTTATCACC AAAGGGCGCG GTATTTCGGT GCATCGCTCC GACTGTGAGC AGGTGAAAGA GTTAATGCGC GTTCACCCTG AGCGTGGCGT CGATGTGGTT TGGGGCGAAA ATTACTCCGG CGGTTATCGC ATGCGCCTGC GCGTCTTAGC CCATGATCGC AGCGGATTAT TGCGGGATCT CACCTCGGTA CTTGCCGCCG AAAAGTCCAA TGTGCTCGCC ATGAGCTCGT CATCGGATAT TAAGAATCAG ACGGCAGCCA TTGAGCTGGA ATTAGAGCTA TACAACCTCG ATGGCTTATC GCGGGTGTTA TCTAAGCTCT CCCAAGTCGA TAGCGTGATT GAAGCACGCA GATTGTAA
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Protein sequence | MVSVREAHFN DPDFHLEEWV ARYVSHVDEA QTLLALIAQV DALPAKSPAA KRELLEHARE MIEILAPLNM DIETLQAAIL FVVFDAGLLN EEAIKEKFGE PLARLVASVV TMNAIGALKI NPNSRSTEPQ IDNIRRMLLA MVEDVRAVVI KLAERVCLLR AVKNADEETR VLLAREIADI YAPLANRLGI GQLKWELEDI SFRYLHPDTY KEIAKQLDGK RLDREVFIEN FVEQLQQRLD EDHIRAKVYG RPKHIYSIWR KMKGKHLKFD ELFDVRAVRI VTERLQDCYG ALGVVHTLWH HIPREFDDYV ANPKPNGYQS IHTVVVGPEG KTVEIQIRTQ DMHEDAELGV AAHWKYKEGN HSGKQSGYEE KINWLRKILQ WQEDVVESGN LVEEVRSQVF EDRVYVFTPS GEVVDLPLGS TVLDFAYYIH SQVGHKCIGA KVDGRIVPFT YQVETGERIE IITSKHPNPK RDWLNPNLGY IRTSRARSKI QHWFKQQDRD KNIIAGKEML EAELARVSLR IKDATIAVER FNMASMDDLL AAIGGGDVRL HQVVNHIQSK LRLDEASEED AVEELVKKSQ SKSGTNSRGQ VEVNGVGNLL SHIARCCQPV PGDEILGFIT KGRGISVHRS DCEQVKELMR VHPERGVDVV WGENYSGGYR MRLRVLAHDR SGLLRDLTSV LAAEKSNVLA MSSSSDIKNQ TAAIELELEL YNLDGLSRVL SKLSQVDSVI EARRL
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