| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3436 |
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| Symbol | |
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| ID | 1171111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3580652 |
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| End bp | 3581764 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345245 |
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| Product | hypothetical protein |
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| Protein accession | NP_718989 |
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| Protein GI | 24374946 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC TACATTATCT GTACGGCAAA CCGACTGGCA CCGCAGATTT AAGAACCGTT
AACAGCGACT TCATCGTAAA AGAGATCTTA CCTTTTAGCC CATCAGGCGA GGGTGAACAT
CACTTAGTCC ATATTCGTAA AGATGGGCTA AATACGGTGC AAGTAGCTGA AATGCTAGCA
AAGTTTGCTA AGGTTCATCC CAAAGAAGTG ACCTATGCTG GCCAAAAAGA TAAAAATGCC
ATCACAGAGC AATGGTTTGG CATTCGCATC CCTGGCAAAG AAACTCCCGC GTGGATCGAG
CTCAATAGCG ATCGTTTAAC GGTGTTATCC AGTAGTCGCC ACAGCAAAAA GTTACGGATT
GGCGCGCTCT TGGGCAACCG CTTTATTCTG ACACTGCGTA ATGTCACCAA TGTGGAAGAC
ATTATCAGCC GCATTGAAAA AGTCAGCCAA ATCGGTGTAC CGAATTATTT TGGTGAGCAA
CGCTTTGGTC ACGATGGCAA AAACTTGGTG CTTGGTCGGC AAATGCTCGC AGGCAAAAAG
GTTAAAGATC GCAATAAACG CAGCATGTAT CTTTCTGCGG TGCGCTCTCA TCTGTTCAAT
ACCGTTGTGT CCTATCGTCT TACCCATTAT GGCACTCGAC CCTTAGCGGG GGATTGTGTG
ATGCTGGCGG GCAGTAAGAG CTTTTTCGTG ACGCCAGAAT GGGATTTAGT GGTATTAAAG
CGTTTGATTG AAAAGGACAT TCAACTTTCA GCGCCGCTGT GGGGCCGTGG CAAAATGCTA
CCGCAAGGCG AAGCCGCCGA GGTTGAAACC CAAGCGATGG CAGATCTCAC CGAAGATTGC
TACGGTCTTG AGCACGCAGG GCTTGAACAG GAACGCCGCC CATTATTGCT TGAGCCACAA
GGCCTTAAGC ACGAGCAAAC CTCGGATGGA TTGGTACTGG AGTTTATTTT ACCTGCGGGC
TGCTTTGCGA CATCGCTGTT AAGAGAGCTG GTTGATTATC AAGATGTGAA AGAGTTGCAA
TGGCAAACAA CACTCACGGC TGAGACAAAT GTTGTAACAG AGAGCAATAC TGCAGCAGCG
AATGTATCTG ACAATGGTGA GTCAGCTTCA TGA
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| Protein sequence | MSELHYLYGK PTGTADLRTV NSDFIVKEIL PFSPSGEGEH HLVHIRKDGL NTVQVAEMLA
KFAKVHPKEV TYAGQKDKNA ITEQWFGIRI PGKETPAWIE LNSDRLTVLS SSRHSKKLRI
GALLGNRFIL TLRNVTNVED IISRIEKVSQ IGVPNYFGEQ RFGHDGKNLV LGRQMLAGKK
VKDRNKRSMY LSAVRSHLFN TVVSYRLTHY GTRPLAGDCV MLAGSKSFFV TPEWDLVVLK
RLIEKDIQLS APLWGRGKML PQGEAAEVET QAMADLTEDC YGLEHAGLEQ ERRPLLLEPQ
GLKHEQTSDG LVLEFILPAG CFATSLLREL VDYQDVKELQ WQTTLTAETN VVTESNTAAA
NVSDNGESAS
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