| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3430 |
|---|
| Symbol | recA |
|---|
| ID | 1171105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 3573151 |
|---|
| End bp | 3574224 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637345239 |
|---|
| Product | recombinase A |
|---|
| Protein accession | NP_718983 |
|---|
| Protein GI | 24374940 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0468] RecA/RadA recombinase |
|---|
| TIGRFAM ID | [TIGR02012] protein RecA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCG ATCCAAACAA AGAGAAAGCA CTTGCTGCGG TATTGAGCCA AATTGAGAAG
CAATTTGGTA AAGGCTCCAT CATGAAGCTG GGCGAAGACC GCTCTATGGA TGTTGAGACC
ATTTCTACAG GTTCTCTTTC CCTTGACGTC GCTCTTGGGG CAGGTGGTTT GCCTATGGGC
CGTATCGTTG AGATCTATGG TCCAGAGTCA TCAGGTAAAA CAACTCTGAC ATTAGAAGTG
ATTGCCGCCG CTCAGCGCGA AGGTAAAACC TGTGCCTTTA TCGATGCAGA ACACGCTCTT
GATCCTATCT ACGCGAAAAA ATTAGGCGTT GATATTGATA ACTTATTGTG TTCACAGCCC
GATACCGGTG AGCAAGCCCT TGAGATTTGT GATGCATTAA CCCGTTCTGG TGCGGTTGAT
GTGATTATCG TTGACTCGGT AGCGGCATTA ACACCAAAGG CGGAGATTGA AGGTGAAATT
GGTGACTCAC ACATGGGCTT AGCGGCTCGT ATGATGAGCC AAGCAATGCG TAAGTTAGCG
GGTAACCTCA AGCAATCGAA CACTCTGTTA ATCTTCATCA ACCAAATTCG TATGAAGATT
GGGGTGATGT TTGGTAACCC AGAAACCACA ACGGGTGGTA ATGCTCTGAA ATTCTATGCC
TCTGTTCGTT TGGATATCCG CCGTACAGGC GCTATCAAAG AAGGTGATGA GGTGGTTGGT
AACGAGACAC GCGTAAAAGT CGTTAAAAAC AAAGTTGCAG CGCCATTTAA ACAAGCAGAG
TTCCAAATTC TATACGGTCA AGGTATCAAC CGTACTGGCG AGTTAGTTGA TTTAGGTGTA
GCCCATAAAC TGATTGAGAA AGCAGGCGCT TGGTATAGCT ACAAGGGCGA TAAAATTGGT
CAAGGCCGTG CAAATGCGGG TAAATATTTG ACTGAAAACC CAGCTATAGC CGCTGAAATC
GATAAGACAT TGCGTGAGCT ATTGTTGAGT AACCCGAGTG CCCTGGCATC ATCGGCATCC
GATGATGACA ATGTCGAGGG GAATATTGAT TTAGAAACAG GCGAAGTGTT CTGA
|
|---|
| Protein sequence | MKVDPNKEKA LAAVLSQIEK QFGKGSIMKL GEDRSMDVET ISTGSLSLDV ALGAGGLPMG
RIVEIYGPES SGKTTLTLEV IAAAQREGKT CAFIDAEHAL DPIYAKKLGV DIDNLLCSQP
DTGEQALEIC DALTRSGAVD VIIVDSVAAL TPKAEIEGEI GDSHMGLAAR MMSQAMRKLA
GNLKQSNTLL IFINQIRMKI GVMFGNPETT TGGNALKFYA SVRLDIRRTG AIKEGDEVVG
NETRVKVVKN KVAAPFKQAE FQILYGQGIN RTGELVDLGV AHKLIEKAGA WYSYKGDKIG
QGRANAGKYL TENPAIAAEI DKTLRELLLS NPSALASSAS DDDNVEGNID LETGEVF
|
|---|
| |