| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3423 |
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| Symbol | holC |
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| ID | 1171098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3563011 |
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| End bp | 3563475 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637345224 |
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| Product | DNA polymerase III, chi subunit |
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| Protein accession | NP_718976 |
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| Protein GI | 24374933 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2927] DNA polymerase III, chi subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACAAG CGCTGTTTTA TCTGATGCCA CCAACGGGCG AAAACACAGC TCTGAGTGAT
TTATACCAAT TGGCTTGCCG CCTATCCCAA CGAGCGTTTA TAGACCAACA ACAGGTCTAC
ATTCATTGCC AAGATAAAAA TGTAGCCTTC GAAATTGACG AGTTATTGTG GCAGTTTGAT
CCCAGTGCTT TTGTCCCACA CAACCTAAAA GGTGAAGGCC CAACCACTGG TTCACCCGTT
GAAATCGGTT TTGATCGACT TGGACCTAAC AAAAGTCGCC AACTTCTGAT TAATCTTGCA
GACCAAGTAC CGCCATTTGC GGTAAACTTT GGTCAAATCT TCGATTTTGT GGCTAATGAC
GACCAACATA AAGTGATAGC ACGTGAACGC TACCGCCAAT ACCGTGGCCT AGGGATTGAA
TTAACAACCC AAAATCTAGC GACACATCCA CTTAATTTAG TTTGA
|
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| Protein sequence | MTQALFYLMP PTGENTALSD LYQLACRLSQ RAFIDQQQVY IHCQDKNVAF EIDELLWQFD
PSAFVPHNLK GEGPTTGSPV EIGFDRLGPN KSRQLLINLA DQVPPFAVNF GQIFDFVAND
DQHKVIARER YRQYRGLGIE LTTQNLATHP LNLV
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