Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3361 |
Symbol | |
ID | 1171042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3503585 |
End bp | 3505432 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637345165 |
Product | hypothetical protein |
Protein accession | NP_718915 |
Protein GI | 24374872 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTATAA AAACGAACAT CAGCTTAATC GCATTTGCCC TCACCACCCT ACTAGCACTC CCAACAAGTG CAGTGCCCAG CTTAAATGAC TCACATAATG TAGCCAGTGC AAGTGTTACA GCCCAAAGCG AGTCAGAAAA AGCTAACGCC TTGTTTGAAA CCATCTTCAT GGAAAACATT ATGGCGAGTC CAATAGCGCA AACCTATATG GGCATAAAGC AGGACTATGA CAAGTGGGAT GAAATTGGCG ATGAGGCCGA TGCACTCGAA CTGGCACGCA CCCAAAAACA ATTAGCTGAA ATTAATCAAC TGGATGCAAG TAAGCTTGAC CCGCAAACTC GCCTAAGCCT TGCACTACTA ACACAAAACC TGAATAACGA CATCAAAGAC TATCAATGGC GTTATCATAC TTATCCCGTT AATCAGATGC GTGGTGGTCA CTCGATGATC GCTTCTTTCC TGATTAATCA ACATCAGATC ACCGATGTCA GTGATGCTAA AGCCTATATC AGCCGCCTAA ATGGGGTGCC CAAGCGCTTA ACTCAATTGC AAAAAGCTCT CGAAGTTCGC GCAGAGAAAG GCATTATCGC CCCTAAGTTT GTGTTTGGTT ATGTCATTTC TGATAGCCAA AACATTTTAA AAGGCGCGCC TTTTGATAAA AATGAAGACA GCGCATTACT CGCGGATTTT CGTAAAAAGG TCAAAGCTCT TAGCATCCCT GAAACAGAGA AAGCCCCACT GATAGCCGAA GCTGAAAAGG CACTCACCTC TCAGGTTGCA CCGGCTTATA AGGCACTCAT TTCGTATATT AAAACCTTAG AAGCCAAAGC TGATACCCGC GATGGGGTGT GGAAATTACC CGATGGTGAC GCTTTTTATA ACAATGCTCT TGCGCGCACC ACGACAACCG ATATGACGGC GGATGAAATC CATCAACTCG GCCTTGCCGA AGTTGAACGT ATCCATAATG AGATGCGTGC CATCATGAAA AAAGTGCACT TTAACGGTAC GCTGCAAGCA TTCTTCGCCT TTATGCGTAA CAATCCACAG TTCTATTATC CCAATACGCC GGAAGGTAAA GCGGCCTATT TAGCCGATGC GACTCAACTC ATAGATAATA TGCACTCGCG CTTAGATGAG GTCTTTAAGG TCAAACCGAA GGCGGCAATG ATCGTCAAAC AGGTTGAATC CTTTAGAGAA AAATCTGCGG GTAAAGCCTT TTATGAACAA CCTGCCCCCG ATGGTTCTCG TCCAGGTAGC TACTACGCTA ACCTCTACGA TATGAAAGCC ATGCCAAAGT ATCAAATGGA AGCACTGGCC TATCACGAAG GGATCCCTGG GCACCATATG CAAATCGCTA TCTCGCAAGA GCTTAAAGAT ATTCCTAAGT TCCGTAAGTT CGGTGGCTAT ACCGCCTATA TCGAAGGCTG GGGACTGTAC AGTGAGTCTT TCCCGAAAGA GATGGGTTTA TATGCCGATC CTTATTCTGA TTTTGGTCGA CTGGCGATGG AGTTATGGCG CGCTTGCCGT CTAGTCGTCG ATACCGGCAT TCATGCAAAA AAATGGACCC GCGAACAAGG TATTGCCTAT TACGTTGACA ATACGCCCAA TGCAAAATCC GATGCGGTGA AAATGGTGGA GCGTCATATC GTGATGCCAT CTCAAGCCAC AGCCTATAAA GTCGGGATGA TTAAGTTGCT CGAACTAAGA CACAAAGCTG AAAAACAGCT AGGTGATAAA TTTGATATCC GAGATTTCCA TACCTTAATT TTGGCAAACG GCGCACTGCC TTTAGATGTG CTTGAAGAGC ATGTTAATCA ATGGATTGCC AGCGTTAACA AAGCCTAA
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Protein sequence | MPIKTNISLI AFALTTLLAL PTSAVPSLND SHNVASASVT AQSESEKANA LFETIFMENI MASPIAQTYM GIKQDYDKWD EIGDEADALE LARTQKQLAE INQLDASKLD PQTRLSLALL TQNLNNDIKD YQWRYHTYPV NQMRGGHSMI ASFLINQHQI TDVSDAKAYI SRLNGVPKRL TQLQKALEVR AEKGIIAPKF VFGYVISDSQ NILKGAPFDK NEDSALLADF RKKVKALSIP ETEKAPLIAE AEKALTSQVA PAYKALISYI KTLEAKADTR DGVWKLPDGD AFYNNALART TTTDMTADEI HQLGLAEVER IHNEMRAIMK KVHFNGTLQA FFAFMRNNPQ FYYPNTPEGK AAYLADATQL IDNMHSRLDE VFKVKPKAAM IVKQVESFRE KSAGKAFYEQ PAPDGSRPGS YYANLYDMKA MPKYQMEALA YHEGIPGHHM QIAISQELKD IPKFRKFGGY TAYIEGWGLY SESFPKEMGL YADPYSDFGR LAMELWRACR LVVDTGIHAK KWTREQGIAY YVDNTPNAKS DAVKMVERHI VMPSQATAYK VGMIKLLELR HKAEKQLGDK FDIRDFHTLI LANGALPLDV LEEHVNQWIA SVNKA
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