Gene SO_3361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3361 
Symbol 
ID1171042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3503585 
End bp3505432 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content45% 
IMG OID637345165 
Producthypothetical protein 
Protein accessionNP_718915 
Protein GI24374872 
COG category[S] Function unknown 
COG ID[COG4805] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTATAA AAACGAACAT CAGCTTAATC GCATTTGCCC TCACCACCCT ACTAGCACTC 
CCAACAAGTG CAGTGCCCAG CTTAAATGAC TCACATAATG TAGCCAGTGC AAGTGTTACA
GCCCAAAGCG AGTCAGAAAA AGCTAACGCC TTGTTTGAAA CCATCTTCAT GGAAAACATT
ATGGCGAGTC CAATAGCGCA AACCTATATG GGCATAAAGC AGGACTATGA CAAGTGGGAT
GAAATTGGCG ATGAGGCCGA TGCACTCGAA CTGGCACGCA CCCAAAAACA ATTAGCTGAA
ATTAATCAAC TGGATGCAAG TAAGCTTGAC CCGCAAACTC GCCTAAGCCT TGCACTACTA
ACACAAAACC TGAATAACGA CATCAAAGAC TATCAATGGC GTTATCATAC TTATCCCGTT
AATCAGATGC GTGGTGGTCA CTCGATGATC GCTTCTTTCC TGATTAATCA ACATCAGATC
ACCGATGTCA GTGATGCTAA AGCCTATATC AGCCGCCTAA ATGGGGTGCC CAAGCGCTTA
ACTCAATTGC AAAAAGCTCT CGAAGTTCGC GCAGAGAAAG GCATTATCGC CCCTAAGTTT
GTGTTTGGTT ATGTCATTTC TGATAGCCAA AACATTTTAA AAGGCGCGCC TTTTGATAAA
AATGAAGACA GCGCATTACT CGCGGATTTT CGTAAAAAGG TCAAAGCTCT TAGCATCCCT
GAAACAGAGA AAGCCCCACT GATAGCCGAA GCTGAAAAGG CACTCACCTC TCAGGTTGCA
CCGGCTTATA AGGCACTCAT TTCGTATATT AAAACCTTAG AAGCCAAAGC TGATACCCGC
GATGGGGTGT GGAAATTACC CGATGGTGAC GCTTTTTATA ACAATGCTCT TGCGCGCACC
ACGACAACCG ATATGACGGC GGATGAAATC CATCAACTCG GCCTTGCCGA AGTTGAACGT
ATCCATAATG AGATGCGTGC CATCATGAAA AAAGTGCACT TTAACGGTAC GCTGCAAGCA
TTCTTCGCCT TTATGCGTAA CAATCCACAG TTCTATTATC CCAATACGCC GGAAGGTAAA
GCGGCCTATT TAGCCGATGC GACTCAACTC ATAGATAATA TGCACTCGCG CTTAGATGAG
GTCTTTAAGG TCAAACCGAA GGCGGCAATG ATCGTCAAAC AGGTTGAATC CTTTAGAGAA
AAATCTGCGG GTAAAGCCTT TTATGAACAA CCTGCCCCCG ATGGTTCTCG TCCAGGTAGC
TACTACGCTA ACCTCTACGA TATGAAAGCC ATGCCAAAGT ATCAAATGGA AGCACTGGCC
TATCACGAAG GGATCCCTGG GCACCATATG CAAATCGCTA TCTCGCAAGA GCTTAAAGAT
ATTCCTAAGT TCCGTAAGTT CGGTGGCTAT ACCGCCTATA TCGAAGGCTG GGGACTGTAC
AGTGAGTCTT TCCCGAAAGA GATGGGTTTA TATGCCGATC CTTATTCTGA TTTTGGTCGA
CTGGCGATGG AGTTATGGCG CGCTTGCCGT CTAGTCGTCG ATACCGGCAT TCATGCAAAA
AAATGGACCC GCGAACAAGG TATTGCCTAT TACGTTGACA ATACGCCCAA TGCAAAATCC
GATGCGGTGA AAATGGTGGA GCGTCATATC GTGATGCCAT CTCAAGCCAC AGCCTATAAA
GTCGGGATGA TTAAGTTGCT CGAACTAAGA CACAAAGCTG AAAAACAGCT AGGTGATAAA
TTTGATATCC GAGATTTCCA TACCTTAATT TTGGCAAACG GCGCACTGCC TTTAGATGTG
CTTGAAGAGC ATGTTAATCA ATGGATTGCC AGCGTTAACA AAGCCTAA
 
Protein sequence
MPIKTNISLI AFALTTLLAL PTSAVPSLND SHNVASASVT AQSESEKANA LFETIFMENI 
MASPIAQTYM GIKQDYDKWD EIGDEADALE LARTQKQLAE INQLDASKLD PQTRLSLALL
TQNLNNDIKD YQWRYHTYPV NQMRGGHSMI ASFLINQHQI TDVSDAKAYI SRLNGVPKRL
TQLQKALEVR AEKGIIAPKF VFGYVISDSQ NILKGAPFDK NEDSALLADF RKKVKALSIP
ETEKAPLIAE AEKALTSQVA PAYKALISYI KTLEAKADTR DGVWKLPDGD AFYNNALART
TTTDMTADEI HQLGLAEVER IHNEMRAIMK KVHFNGTLQA FFAFMRNNPQ FYYPNTPEGK
AAYLADATQL IDNMHSRLDE VFKVKPKAAM IVKQVESFRE KSAGKAFYEQ PAPDGSRPGS
YYANLYDMKA MPKYQMEALA YHEGIPGHHM QIAISQELKD IPKFRKFGGY TAYIEGWGLY
SESFPKEMGL YADPYSDFGR LAMELWRACR LVVDTGIHAK KWTREQGIAY YVDNTPNAKS
DAVKMVERHI VMPSQATAYK VGMIKLLELR HKAEKQLGDK FDIRDFHTLI LANGALPLDV
LEEHVNQWIA SVNKA