Gene SO_3359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3359 
Symbol 
ID1171040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp3500972 
End bp3502129 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content46% 
IMG OID637345163 
Productoxygen-independent coproporphyrinogen III oxidase, putative 
Protein accessionNP_718913 
Protein GI24374870 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTGA ATGTGTCACC TCAGCTAACC TTACCGCCAT TGAGCTTGTA CATTCATATC 
CCATGGTGTG TACAAAAATG TCCTTACTGC GACTTTAACT CCCATGGGCA AAATGGTGAA 
TTACCCCAGC AAGCCTATGT GGATGCTCTG CTGGCGGACT TACGCCAAGA CTTGCACTTA 
GTACAAGGCC GTAAGCTACA CACCATTTTT ATTGGTGGTG GAACGCCGTC TCTGTTTGAT 
GCCAATCAAA TCAAACGGAT ATTGGATGAT GCCAATGCTC TCATTCCCTT TAGTGATGGC 
ATTGAAATCA CCATGGAAGC CAACCCTGGC ACCTTAGAGC ACGATGACTT TAGCGCCTAC 
CGCGCCGCTG GCGTAACGCG TTTATCCATT GGGGTGCAAA GTTTCTCCAA GGATAAGCTT 
AATCTCTTAG GCCGTATTCA CGATCAAAAT GAAGCCCAAA CTGCCGCTCA AAAAGCCCGT 
CAAGCGGACT ATTTAAGTTT TAATTTGGAT CTGATGCACG GACTTCCTAA CCAAAGTTTT 
GAAGAAGCGA TGGCGGATAT AGATACCGCT GCATCCCTCA ATCCACCGCA TTTGTCTTGG 
TATCAACTAA CGATTGAGCC CAATACCTTG TTCCACTCTA AGCCACCACA ACTTCCCGAT 
GATGAAGATC TCTGGCAGAT CTATGAACAA GGGCAACAAA AGCTAGCGGC TTTAGGTTAT 
GAGCAGTATG AAATCTCGGC CTATGCCAAA CCCGGTTATC AATGCCAGCA TAACCTTAAT 
TATTGGCAAT TTGGCGATTA TTTAGGCATA GGCTGTGGCG CCCACGGCAA AGTCACCTTA 
CCCGAAGAAA ATCGTATTAT TCGCACGGTT AAAATCAAGC ATCCGAAGGG CTATTTAACT 
GCCGATAATT ACACCTTCGA ACAAACAGAA GTCGCGCAAG AAGATCGCGC ACTCGAATAT 
TTGATGAATC GTTTACGCCT AATGACGCCA ATCCCTAAGC AAGAGTTTGA AGATAGAACG 
GGGTTGCCTC GAGATGTCTT GAAGGATGGG ATGGAAAAGG CCAAACAACG GGGTTTACTC 
ACCGAATCGG CCGAACACTG GCAATTAACC AATAAAGGTC ACATGTTTGT GAATGATTTA 
TTGACACAAT TCTGCTAA
 
Protein sequence
MSVNVSPQLT LPPLSLYIHI PWCVQKCPYC DFNSHGQNGE LPQQAYVDAL LADLRQDLHL 
VQGRKLHTIF IGGGTPSLFD ANQIKRILDD ANALIPFSDG IEITMEANPG TLEHDDFSAY 
RAAGVTRLSI GVQSFSKDKL NLLGRIHDQN EAQTAAQKAR QADYLSFNLD LMHGLPNQSF 
EEAMADIDTA ASLNPPHLSW YQLTIEPNTL FHSKPPQLPD DEDLWQIYEQ GQQKLAALGY 
EQYEISAYAK PGYQCQHNLN YWQFGDYLGI GCGAHGKVTL PEENRIIRTV KIKHPKGYLT 
ADNYTFEQTE VAQEDRALEY LMNRLRLMTP IPKQEFEDRT GLPRDVLKDG MEKAKQRGLL 
TESAEHWQLT NKGHMFVNDL LTQFC