Gene SO_3358 details

Gene Information

• Locus tag: SO_3358
• ID: 1171039
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3500355
• End bp: 3500972
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637345162
• Product: putative deoxyribonucleotide triphosphate pyrophosphatase
• Protein accession: NP_718912
• Protein GI: 24374869
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0127] Xanthosine triphosphate pyrophosphatase
• TIGRFAM ID: [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACAAA TCGTCCTCGC CAGTGGCAAT AAAGGTAAAC TTGCCGAATT CGATCAAATG 
CTCGCCGCCT ATGGCGTAAA AGTGCTGCCA CAGAGCCAAT TTAACGTTAG CGAAGTTGCC 
GAAACGGGCA CCACCTTTGT TGAAAACGCC ATTATCAAAG CCAGACATGC GGCGCAAATC 
ACAGGGCATG CAGCTATTGC CGATGACTCG GGATTAGAGG TCGATTTACT CCAAGGTGTG 
CCGGGGATTT ACTCTGCGCG CTATGCGGGG GAAAATGCCA AGGATCAAGA TAATGTGTTA 
AAACTCTTAG ACACATTAAA AGATTATCCA GCGCCCCGCA CAGCAAGATT CCAATGTGTT 
TTAGTCTATA TGCGCCATGC CAAGGACCCG ACCCCAATCA TTTGCCAAGC CTCGTGGGAA 
GGCCAAATCG ATTTCGTGCA ACGTGGTGAC AACGGCCATG GTTACGATCC GATTTTTATT 
CCTGAGCACC ACGATTGCAG CGCCGCCCAA ATGAGCAGTG ACGAGAAAAA TACCCTGAGC 
CATCGTGGTA AAGCCTTAGT GCAACTGATT ACTGCCATGC AGGAAAAAGG CGTATTTACC 
GACAGGAACG CCCAATAA 

 

Protein sequence

MQQIVLASGN KGKLAEFDQM LAAYGVKVLP QSQFNVSEVA ETGTTFVENA IIKARHAAQI 
TGHAAIADDS GLEVDLLQGV PGIYSARYAG ENAKDQDNVL KLLDTLKDYP APRTARFQCV 
LVYMRHAKDP TPIICQASWE GQIDFVQRGD NGHGYDPIFI PEHHDCSAAQ MSSDEKNTLS 
HRGKALVQLI TAMQEKGVFT DRNAQ