Gene SO_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3346 
Symbol 
ID1171028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp3492032 
End bp3492595 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content46% 
IMG OID637345151 
Producthypothetical protein 
Protein accessionNP_718900 
Protein GI24374857 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGTT TGCAGAACCA TTTTTTAATT GCAATGCCGT CACTCGATGA CACTTTTTTT 
GAGCGAACCG TCATTTACCT ATGTGAACAC GATGAAAAAG GCGCAATGGG GTTAGTGATT 
AATAAACCTC TGGGTATTGA AGTTAACTCA TTACTGGAGC AGATGGATCT ACCAACAGAG 
CAAGTCTCTG CAGATTTGGC AATGGGATCG CAAGTCTTAA TGGGCGGTCC AGTTTCCCAA 
GACAGAGGTT TTGTCCTGCA TACATCCCAA CCCTATTGGG CTAACAGTAC GGAATTAGGT 
TCAGGATTGA TGCTTACTAC TTCTCGCGAT GTATTAACAG CCATCGGCAG TAAGCGTTCG 
CCGGATAAGT TTCTTGTGGC ATTGGGCTAT GCTGGCTGGA GTAAAAATCA GTTAGAGCAA 
GAACTTGCCG ATAATTCTTG GCTCACTATC CCAGCCGATC ATGCCCTACT CTTCGATATA 
AACCACGAAG ATAGATGGCA ACAAGCTAGC CGTTCATTGG GCTTTGAGGC TTGGCAACTC 
TCAACGCAGG CGGGCCACGC TTAA
 
Protein sequence
MESLQNHFLI AMPSLDDTFF ERTVIYLCEH DEKGAMGLVI NKPLGIEVNS LLEQMDLPTE 
QVSADLAMGS QVLMGGPVSQ DRGFVLHTSQ PYWANSTELG SGLMLTTSRD VLTAIGSKRS 
PDKFLVALGY AGWSKNQLEQ ELADNSWLTI PADHALLFDI NHEDRWQQAS RSLGFEAWQL 
STQAGHA